iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120931

Ensembl Protein ID

EOX97211

UniProt Accession

A0A061DYT2; A0A061DYT2_THECC

Genbank Protein ID

EOX97211.1

Protein Name

RING/U-box superfamily protein

Genbank Nucleotide ID

CM001880

Gene Name

TCM_006302

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_006302	EOX97211	EOX97211

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.90e-09	36.9	149	191

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f+d   +++lp C H+fh dC+ +w       + +++CPlCr
   Q: 149  CAVCLLEFEDDeyVRTLPvCSHAFHVDCIDAW------LKSHANCPLCR 191
           ****99994444499999**************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGFTTWAPSP SPTPSSSPSS SPPPSSSSST SSSSSSSSSP PPSKLPVDFS PPLIAMVVVV 60
AAAFLIVTYS RLISKRLVPP ILRLLRFFRR RRRRRRYLPS TTTDLDSLPP SDPFELPLSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTAACGCCA GACTCCAGAA ACAACAACCC CACCACCACC ACTCTTACGA AATCACTACC 60
ATCGCCGGTC ATGGGGTTCA CCACCTGGGC CCCATCTCCA TCCCCGACTC CTTCCTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002525	Amborella trichopoda	49.67	1.00e-57	216.00
IUUC-Aly-005738	Arabidopsis lyrata	53.75	9.00e-65	239.00
IUUC-Ath-006761	Arabidopsis thaliana	54.46	4.00e-64	238.00
IUUC-Bdi-014398	Brachypodium distachyon	40.18	9.00e-29	120.00
IUUC-Bol-015284	Brassica oleracea	51.56	2.00e-55	208.00
IUUC-Bra-017477	Brassica rapa	49.84	1.00e-57	216.00
IUUC-Gma-044120	Glycine max	66.76	1.00e-94	338.00
IUUC-Lpe-051662	Leersia perrieri	37.61	1.00e-24	106.00
IUUC-Mtr-058344	Medicago truncatula	63.87	3.00e-93	334.00
IUUC-Mac-065095	Musa acuminata	63.16	2.00e-25	108.00
IUUC-Ogu-077985	Oryza glumaepatula	35.28	2.00e-22	99.80
IUUC-Oin-079093	Oryza indica	35.14	2.00e-20	93.20
IUUC-Opu-083940	Oryza punctata	35.87	9.00e-21	94.00
IUUC-Oru-084986	Oryza rufipogon	35.94	1.00e-14	73.20
IUUC-Pop-099495	Populus trichocarpa	64.49	8.00e-92	329.00
IUUC-Ppe-101726	Prunus persica	66.32	7.00e-94	336.00
IUUC-Pgr-103645	Puccinia graminis	44.74	2.00e-14	72.00
IUUC-Sit-109801	Setaria italica	39.38	5.00e-28	118.00
IUUC-Sly-111253	Solanum lycopersicum	63.84	7.00e-84	303.00
IUUC-Stu-112012	Solanum tuberosum	64.32	2.00e-84	305.00
IUUC-Sbi-114003	Sorghum bicolor	36.47	3.00e-27	115.00
IUUC-Tae-123946	Triticum aestivum	43.13	2.00e-27	115.00
IUUC-Vvi-131492	Vitis vinifera	64.00	7.00e-92	329.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence