iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131169

UUCD1 version

UUC-ViV-00571

Ensembl Protein ID

VIT_03s0091g00400.t01

UniProt Accession

F6H680; F6H680_VITVI

Genbank Protein ID

CCB47722.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595242

Gene Name

VIT_03s0091g00400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_03s0091g00400	VIT_03s0091g00400.t01	VIT_03s0091g00400.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-12	48.3	522	549

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf....sdtllvsGsdDgtikvWD 29
           sv +l++    +   l++Gsd+g++k++D
   Q: 522  SVLGLCWlkkhP-SKLIAGSDNGSLKLYD 549
           7999****9754.789************* PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAVDIPTLEE RYVDSCRQHG APPNTEVLSA LLKAKVKRNN HEPCSMVVFL DRVKDIDFYP 60
LLDLLMEIDA SEIDAVDIFN ESSCVLNGEY ALSLMRAINQ KLRIVDLQDL SLGKDFLRDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCAAATAGC CATGGCTGTG GATATTCCAA CCTTGGAGGA AAGGTATCAA ATTTGGTTTA 60
ATTGTTTTGG AAATTCTGTG GAGCTTTGCA ACAAATTGTA GTTCAGTCGT GTTGTTTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR003603--U2A'_phosphoprotein32A_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00446--LRRcap
SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0071493--P:cellular response to UV-B

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005966	Arabidopsis lyrata	53.02	0.00e+00	710.00
IUUC-Ath-007257	Arabidopsis thaliana	53.28	0.00e+00	707.00
IUUC-Bol-016080	Brassica oleracea	53.11	0.00e+00	789.00
IUUC-Bra-017152	Brassica rapa	52.72	0.00e+00	774.00
IUUC-Gma-043038	Glycine max	63.88	0.00e+00	990.00
IUUC-Mtr-057634	Medicago truncatula	61.42	0.00e+00	944.00
IUUC-Pop-099267	Populus trichocarpa	65.03	0.00e+00	975.00
IUUC-Ppe-101596	Prunus persica	69.83	0.00e+00	934.00
IUUC-Sly-111655	Solanum lycopersicum	63.40	0.00e+00	892.00
IUUC-Stu-111974	Solanum tuberosum	63.87	0.00e+00	900.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence