iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080497

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN538728.1_FG007	KN538728.1_FGT007	KN538728.1_FGP007

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.20e-09	37.4	147	188

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ f   d+++ l+CgH fh +Cl+ w       +k + CP+Cr
   Q: 147  CSICLDGFydGDELIKLRCGHRFHSNCLEPW------VRKCADCPYCR 188
           ********88555999***************......**********8 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MDRVLSYIDN SNIGDSATRR NRLDRLMFRT NERLPGAVLQ AQARVLERLR GISIGSSGSR 60
PSITLDEFSA TDVFRIIDFG NRDAPYEANR SSSSLAHPSS ESDEERSPID TSSLKRSRGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGTGAT GGTGCCTCAT CTTTCTTCAC TCACTCCTGA AAATTGAAAT GGCTAAGATG 60
TATGTTTAGA ATATTGGCTA CGCTTATTAG AATGTCAATA CTCAGACCTG CGCATTTAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003023	Amborella trichopoda	39.43	5.00e-20	90.50
IUUC-Aly-006173	Arabidopsis lyrata	37.13	5.00e-17	80.50
IUUC-Ath-007567	Arabidopsis thaliana	41.67	2.00e-13	68.20
IUUC-Bdi-014868	Brachypodium distachyon	82.47	7.00e-88	315.00
IUUC-Bol-015528	Brassica oleracea	45.57	3.00e-16	77.80
IUUC-Bra-016749	Brassica rapa	35.68	4.00e-18	84.00
IUUC-Hvu-047572	Hordeum vulgare	84.10	1.00e-87	314.00
IUUC-Mtr-058054	Medicago truncatula	49.37	3.00e-19	87.80
IUUC-Mac-064949	Musa acuminata	48.54	4.00e-30	124.00
IUUC-Oba-075741	Oryza barthii	98.46	2.00e-101	360.00
IUUC-Obr-076821	Oryza brachyantha	94.33	2.00e-96	344.00
IUUC-Ogl-077510	Oryza glaberrima	98.45	4.00e-101	359.00
IUUC-Oin-080050	Oryza indica	98.45	3.00e-101	360.00
IUUC-Ome-081477	Oryza meridionalis	98.97	1.00e-101	361.00
IUUC-Oni-083119	Oryza nivara	98.45	3.00e-101	360.00
IUUC-Opu-083834	Oryza punctata	94.04	6.00e-74	268.00
IUUC-Osa-086007	Oryza sativa	98.97	1.00e-101	361.00
IUUC-Ppa-095736	Physcomitrella patens	41.77	5.00e-15	74.30
IUUC-Pop-099358	Populus trichocarpa	40.00	7.00e-20	90.10
IUUC-Ppe-101691	Prunus persica	41.04	2.00e-19	88.20
IUUC-Sit-110752	Setaria italica	81.44	2.00e-83	300.00
IUUC-Sbi-114507	Sorghum bicolor	82.99	2.00e-85	307.00
IUUC-Tca-121654	Theobroma cacao	37.58	3.00e-20	90.90
IUUC-Tae-123420	Triticum aestivum	80.61	2.00e-82	297.00
IUUC-Vvi-131679	Vitis vinifera	41.14	2.00e-25	108.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence