iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005788

UUCD1 version

UUC-ArL-00950

Ensembl Protein ID

fgenesh1_pg.C_scaffold_7000359

UniProt Accession

D7MBG7; D7MBG7_ARALL

Genbank Protein ID

EFH43267.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

GL348719

Gene Name

ARALYDRAFT_353186

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pg.C_scaffold_7000359	fgenesh1_pg.C_scaffold_7000359	fgenesh1_pg.C_scaffold_7000359

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.60e-27	94.3	253	324

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +pe+f+Cp+sl++M dPv+++sG+t++r  I+ w+++g+ +cP+ r++l +  l Pn +l+  i++wc++n+
   Q: 253  LPEQFKCPLSLTVMYDPVIISSGHTFERMQIQNWFDEGNDSCPISRRKLNDFALEPNVALKIQISKWCARNG 324
           59*******************************************************************997 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MRIDYTERMP QSYKMHSSMC LELKKFVDRI MRIFPDIEDA RPGCSSGIQT LCLLHIALDR 60
AKQLLQYCSE SSKLYMAVTG DAILSRGSRA KKSLEQCLND IRSMVPTILD TKISQIVQDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGATTG ATTACACAGA ACGGATGCCT CAATCCTATA AGGTTTGTTG TTTTATCTCT 60
TATGATGGGA ATTTTCTGTC TTTAAGGTTT GATATTAGTA ATGACTGACT TTGTTCTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_353186

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000166	Aegilops tauschii	31.45	3.00e-89	322.00
IUUC-Ath-006905	Arabidopsis thaliana	83.69	0.00e+00	1152.00
IUUC-Bol-016241	Brassica oleracea	67.20	0.00e+00	890.00
IUUC-Bra-018043	Brassica rapa	68.37	0.00e+00	904.00
IUUC-Gma-044052	Glycine max	39.65	3.00e-133	468.00
IUUC-Lpe-050784	Leersia perrieri	32.29	5.00e-84	305.00
IUUC-Mtr-058085	Medicago truncatula	38.24	7.00e-128	450.00
IUUC-Pop-099657	Populus trichocarpa	40.24	4.00e-143	501.00
IUUC-Ppe-101895	Prunus persica	37.82	1.00e-76	280.00
IUUC-Tca-121394	Theobroma cacao	38.49	3.00e-132	464.00
IUUC-Tae-123767	Triticum aestivum	31.45	2.00e-89	323.00
IUUC-Tur-126678	Triticum urartu	32.10	7.00e-83	301.00
IUUC-Vvi-130887	Vitis vinifera	38.91	3.00e-117	415.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence