iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-018043

Ensembl Protein ID

Bra011690.1-P

UniProt Accession

M4D5D3; M4D5D3_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra011690	Bra011690.1	Bra011690.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.50e-29	101.4	232	303

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +pe+f+Cp+sl++M+dPv+++sG+t++r  ++kw+++g+++cP+tr++l++ +++Pn ++++ i++wc++n+
   Q: 232  LPEHFKCPLSLTVMHDPVIISSGHTFERMWVQKWFDEGNESCPKTRRTLDDFTMKPNVAMKEQISKWCSRNG 303
           79*******************************************************************997 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MHSSMCLELK NLVDRVMRIF PDIEDARPGS STGIQTLCLI NKALEKAKLL LQYCSESSKL 60
YMAVTGEAIL SRGCRAKKLL EQSLSDIRSM VPTVLATKIT QVVQDLRSTV LALESSEEEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCACTCTT CCATGTGCTT AGAGTTAAAG AACTTAGTTG ATAGGGTCAT GAGAATCTTT 60
CCTGATATAG AAGATGCTAG ACCAGGATCC TCCACAGGGA TACAGACTCT ATGCTTGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005788	Arabidopsis lyrata	69.31	0.00e+00	897.00
IUUC-Ath-006905	Arabidopsis thaliana	66.58	0.00e+00	876.00
IUUC-Bol-016241	Brassica oleracea	90.69	0.00e+00	1201.00
IUUC-Gma-044030	Glycine max	38.91	5.00e-128	451.00
IUUC-Mtr-058085	Medicago truncatula	38.14	8.00e-125	441.00
IUUC-Pop-099657	Populus trichocarpa	42.01	7.00e-140	491.00
IUUC-Ppe-101895	Prunus persica	37.17	4.00e-80	291.00
IUUC-Sit-110432	Setaria italica	32.14	2.00e-75	276.00
IUUC-Sly-111406	Solanum lycopersicum	37.07	3.00e-103	369.00
IUUC-Stu-112174	Solanum tuberosum	37.03	2.00e-108	386.00
IUUC-Sbi-113885	Sorghum bicolor	30.27	4.00e-68	252.00
IUUC-Tca-121394	Theobroma cacao	39.00	2.00e-131	462.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence