iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078199

Ensembl Protein ID

OGLUM02G30160.3

UniProt Accession

A0A0D9YX42; A0A0D9YX42_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM02G30160	OGLUM02G30160.2	OGLUM02G30160.2
OGLUM02G30160	OGLUM02G30160.3	OGLUM02G30160.3
OGLUM02G30160	OGLUM02G30160.4	OGLUM02G30160.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.10e-30	103.7	308	379

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p+ef+CpIs +lMrdPv++ sG+ty+r++Ie+w+++g  tcP t+ +l++  ++Pn+ +r+li +wc+e++
   Q: 308  PPAEFCCPISTKLMRDPVIITSGQTYERENIERWFREGYDTCPRTHIKLENFAMIPNTCMRDLIFNWCKEHG 379
           79*******************************************************************996 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MNSEPQLPRM HFDLIRLLPS VLKQFKVLGL KIGSHSSWME NRNKEDMGPS QHNSCPKVHS 60
SMCSELTMML DKVSSILPLI EAARPGCKAG IQELCNLYNI VEKGKLIIQH CVECSKLYLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACAGTG AACCTCAGCT TCCTCGGGTG TGACTTGTGA TTTGGTACTT TAGTATTGGG 60
TAGTTTAGCT GTCTGCCTTC TCCCGTCCTG TTCGTTCCCT GGAGACCAAA ACCTTACCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000166	Aegilops tauschii	73.70	0.00e+00	1078.00
IUUC-Bdi-014593	Brachypodium distachyon	75.38	0.00e+00	1114.00
IUUC-Gma-044052	Glycine max	36.36	4.00e-107	381.00
IUUC-Hvu-047756	Hordeum vulgare	73.96	0.00e+00	1077.00
IUUC-Lpe-050784	Leersia perrieri	83.96	0.00e+00	1282.00
IUUC-Oba-075842	Oryza barthii	98.32	0.00e+00	1458.00
IUUC-Obr-076217	Oryza brachyantha	87.76	0.00e+00	1323.00
IUUC-Ogl-077921	Oryza glaberrima	98.57	0.00e+00	1458.00
IUUC-Oin-079116	Oryza indica	98.37	0.00e+00	1518.00
IUUC-Olo-080352	Oryza longistaminata	96.17	0.00e+00	1360.00
IUUC-Ome-081110	Oryza meridionalis	97.62	0.00e+00	1503.00
IUUC-Oni-082415	Oryza nivara	96.99	0.00e+00	1484.00
IUUC-Opu-083658	Oryza punctata	95.49	0.00e+00	1434.00
IUUC-Oru-084974	Oryza rufipogon	96.97	0.00e+00	1479.00
IUUC-Osa-086052	Oryza sativa	98.57	0.00e+00	1458.00
IUUC-Pop-099657	Populus trichocarpa	39.77	7.00e-129	454.00
IUUC-Sit-110432	Setaria italica	74.42	0.00e+00	1014.00
IUUC-Sly-111406	Solanum lycopersicum	36.09	3.00e-101	362.00
IUUC-Stu-112174	Solanum tuberosum	36.55	6.00e-107	381.00
IUUC-Sbi-113885	Sorghum bicolor	72.48	0.00e+00	957.00
IUUC-Tca-121394	Theobroma cacao	35.35	1.00e-106	380.00
IUUC-Tae-125779	Triticum aestivum	72.69	0.00e+00	1085.00
IUUC-Tur-126678	Triticum urartu	73.09	0.00e+00	977.00
IUUC-Vvi-130887	Vitis vinifera	36.98	4.00e-107	381.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence