iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098901

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000341

Gene Name

POPTRDRAFT_593926; POPTR_0005s12380g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s12380	POPTR_0005s12380.1	POPTR_0005s12380.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.60e-29	100.4	273	344

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +pe+f+CpIs+ +M dPvv++sG+t++r  I+kw+++g+ tcP+t+ +l +  l+Pn+t+++li++wc + +
   Q: 273  PPEDFKCPISMRVMYDPVVIASGQTFERMWIQKWFDEGNDTCPKTKVKLPHCALIPNTTIKDLISKWCVKYG 344
           79******************************************************************9865 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGTDAAEVVE TLPFPYSFKV HHSMCTELMK LVDKVSKTFL EIEAARPRCS SGIQALCLLN 60
KALEKARQHL QYCCDSSKLY LAITGDAIVS KCQRSRNLLE QTLAQMQTMV PIMLAAEISQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAACTG ATGCTGCTGA AGTAGTGGAG ACACTGCCAT TTCCTTATTC CTTCAAGGTA 60
ACTATGAGCC AAGGCCTGAT TTTCTCCTAC AGTTGGAATC GTTTGCTTCA ATTACACAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0005s12380g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-044030	Glycine max	49.61	0.00e+00	678.00
IUUC-Lpe-050784	Leersia perrieri	39.47	5.00e-126	444.00
IUUC-Ppe-101895	Prunus persica	54.98	3.00e-154	537.00
IUUC-Spo-108230	Schizosaccharomyces pombe	33.33	2.00e-01	29.60
IUUC-Sit-110432	Setaria italica	37.74	5.00e-124	437.00
IUUC-Sbi-113885	Sorghum bicolor	38.22	6.00e-116	410.00
IUUC-Tca-121394	Theobroma cacao	58.98	0.00e+00	832.00
IUUC-Vvi-130887	Vitis vinifera	57.45	0.00e+00	762.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence