iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-015043

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

BRADI_3g12560

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G12560	BRADI3G12560.1	BRADI3G12560.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.70e-09	36.2	108	150

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f   ++ ++ lp C H+fh dC+ +w         +++CPlCr
   Q: 108  CAVCLGEFsegER-LRRLPaCLHAFHIDCIDAW------LHATANCPLCR 150
           ********55444.888889*************......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MAMGIGAQAA AADPFPGGNS SSFVILSVSV AGILAISLLL LTYYLFLTRC ASWRHNQLDD 60
VAHHHRYVVY SPRLEHRRRG LEEAAIRRIP TLRYNHEKAK KAAVASECAV CLGEFSEGER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCCATAAAA AAGGTCAAAG CAGACACGGG GAAACACCAA CGCCAACGAC CAGTCTCCAT 60
CACACACGGC ACCACCATGC TAGCTGCACA TTCCTTGTCC AGCACTCGTC AACGGAACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:104583516

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000279	Aegilops tauschii	56.02	2.00e-54	204.00
IUUC-Dre-027786	Danio rerio	44.74	6.00e-16	77.80
IUUC-Ete-032882	Echinops telfairi	40.26	8.00e-14	71.60
IUUC-Gma-043446	Glycine max	32.18	5.00e-33	134.00
IUUC-Hvu-047348	Hordeum vulgare	56.57	1.00e-59	222.00
IUUC-Kpa-049210	Komagataella pastoris	29.41	4.00e-08	50.10
IUUC-Mtr-057939	Medicago truncatula	35.48	1.00e-29	122.00
IUUC-Mvi-060267	Microbotryum violaceum	50.00	4.00e-12	66.60
IUUC-Mac-065349	Musa acuminata	35.38	2.00e-30	125.00
IUUC-Oba-075680	Oryza barthii	51.28	2.00e-18	85.10
IUUC-Ogl-077063	Oryza glaberrima	51.28	2.00e-18	85.10
IUUC-Ogu-078464	Oryza glumaepatula	49.36	4.00e-31	127.00
IUUC-Oin-079555	Oryza indica	50.00	4.00e-20	90.50
IUUC-Olo-081023	Oryza longistaminata	50.31	1.00e-17	82.00
IUUC-Ome-081556	Oryza meridionalis	60.92	7.00e-26	109.00
IUUC-Oni-082174	Oryza nivara	48.30	7.00e-16	76.30
IUUC-Oru-084448	Oryza rufipogon	50.00	6.00e-19	86.70
IUUC-Osa-085533	Oryza sativa	50.00	4.00e-19	87.00
IUUC-Pop-098991	Populus trichocarpa	34.62	5.00e-31	127.00
IUUC-Ppe-101210	Prunus persica	35.96	4.00e-30	124.00
IUUC-Sit-110272	Setaria italica	47.16	9.00e-39	152.00
IUUC-Sly-111630	Solanum lycopersicum	41.38	7.00e-40	156.00
IUUC-Stu-111987	Solanum tuberosum	38.27	1.00e-36	145.00
IUUC-Tae-123538	Triticum aestivum	58.11	1.00e-59	222.00
IUUC-Tur-126127	Triticum urartu	58.18	3.00e-56	211.00
IUUC-Vvi-131101	Vitis vinifera	34.78	9.00e-29	120.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence