iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080563

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN538710.1_FG062	KN538710.1_FGT062	KN538710.1_FGP062

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-21	76.9	448	519

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceen 72
           +p++flCp++ ++++ Pv++++G+t++r +I +w+++g + cP+t+q+l++ ++   n +lrrli++w +e+
   Q: 448  IPSDFLCPLTRQIFKRPVTIETGQTFERHAIVQWFDKGIRMCPITGQELESLSIpDINRVLRRLIDNWKSEH 519
           8************************************************999997779**********9987 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MAPPPSSLLR DLLAADGFRN RRKPPDSNPP AAPRTTSMPL QHRRPSRPAR SQSDGLTRSR 60
LRGTNNVGTS DGDGVDAGEE QRTATRRSSA SLMSARSYNN NKDSGGGGSV LTALISLVAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCCGC CGCCGTCGTC ATTGCTCCGC GACCTCCTCG CCGCTGATGG CTTCAGAAAC 60
CGTCGCAAGC CGCCTGACAG TAACCCTCCG GCCGCCCCAA GGACCACGAG CATGCCCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003133	Amborella trichopoda	31.61	4.00e-40	159.00
IUUC-Bdi-014999	Brachypodium distachyon	60.57	0.00e+00	788.00
IUUC-Gma-043901	Glycine max	37.39	7.00e-37	148.00
IUUC-Hvu-047722	Hordeum vulgare	59.36	5.00e-174	604.00
IUUC-Lpe-051567	Leersia perrieri	66.81	0.00e+00	783.00
IUUC-Mtr-058670	Medicago truncatula	38.12	6.00e-38	152.00
IUUC-Mac-065130	Musa acuminata	37.96	5.00e-34	139.00
IUUC-Oba-075449	Oryza barthii	86.14	0.00e+00	1204.00
IUUC-Obr-076588	Oryza brachyantha	76.35	0.00e+00	905.00
IUUC-Ogu-078984	Oryza glumaepatula	85.56	0.00e+00	1171.00
IUUC-Ome-081747	Oryza meridionalis	84.42	0.00e+00	1205.00
IUUC-Oni-082227	Oryza nivara	86.01	0.00e+00	1201.00
IUUC-Opu-083803	Oryza punctata	82.74	0.00e+00	1025.00
IUUC-Oru-084717	Oryza rufipogon	86.01	0.00e+00	1202.00
IUUC-Osa-085390	Oryza sativa	89.25	0.00e+00	1108.00
IUUC-Pop-098857	Populus trichocarpa	39.64	6.00e-39	154.00
IUUC-Ppe-101493	Prunus persica	35.66	6.00e-76	278.00
IUUC-Pte-104390	Pyrenophora teres	38.78	9.00e-03	33.90
IUUC-Sit-110010	Setaria italica	62.92	0.00e+00	722.00
IUUC-Stu-112239	Solanum tuberosum	36.41	9.00e-30	124.00
IUUC-Sbi-113947	Sorghum bicolor	62.59	0.00e+00	789.00
IUUC-Tca-121435	Theobroma cacao	38.74	1.00e-47	184.00
IUUC-Tae-125513	Triticum aestivum	60.24	0.00e+00	640.00
IUUC-Tur-126526	Triticum urartu	63.30	6.00e-67	248.00
IUUC-Vvi-130964	Vitis vinifera	37.40	1.00e-42	167.00
IUUC-Yli-134676	Yarrowia lipolytica	32.20	1.00e-03	36.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence