iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131193

UUCD1 version

UUC-ViV-00820

Ensembl Protein ID

VIT_07s0129g00690.t01

UniProt Accession

F6HSW7; F6HSW7_VITVI

Genbank Protein ID

CCB57777.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596246

Gene Name

HOS15; VIT_07s0129g00690

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_07s0129g00690	VIT_07s0129g00690.t01	VIT_07s0129g00690.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-51	170.5	523	560
UBD/Beta-Prp	2.30e-69	234.4	242	416

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH d+v+++af ++  +l+sGs D ++++W+l++ + +
   Q: 523  GHRDPVYSVAFsPNgEYLASGSLDRSMHIWSLKERKIV 560
           8***********777****************9876655 PP

UBD/Beta-Prp

   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee................tlsghdgvvncvvvhpdgnllvsGslD 158
           v +l+gh+++v+++++sp g+ l+sGs d+t+r+w +  g+c ++                  +++++ v+++ +++dg ll++Gs+D
   Q: 242  VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTCRSSvqngpsnvlvlkhvkgRTNEKSKDVTTLDWNGDGTLLATGSYD 329
           67899**************************************99***************988888899******************* PP
   S: 159  rtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsi 246
           ++ r+W+  +g+l  tl++ h++++ sl+++++g +l++gs+d+t ++wd++t+e  ++++ h  ++++v+   n+  +++ s D+ i
   Q: 330  GQARIWST-NGELRSTLSK-HKGPIFSLKWNRKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHAGPTLDVDWR-NNVSFATSSTDNMI 414
           ******66.9*******99.**************************************************988.88888888889988 PP
   S: 247  ri 248
           ++
   Q: 415  YV 416
           75 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSSITSAELN YLVFRYLHES GFTHSAFSLG YEAGINKCPI DGNMVPPGAL ITFVQKGLQF 60
VEMEANLSNS DTDVDDDFSF LQPLDLITKD VHQLRQMIRE KKRNLQKEKD KESDKEHELV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCCCTCTC TCTCTCTCTT CCTCTCTATC GCACTTATGG CTCACTGAAC GTAGGACCAC 60
ATAATCCTAT AACCTTGCTT CGCGGCCAAC GACGCCGGCG ACGATGAGCT CCATCACCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0000118--C:histone deacetylase complex
GO:0003714--F:transcription corepressor activity
GO:0016575--P:histone deacetylation
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000916	Aegilops tauschii	76.06	4.00e-66	242.00
IUUC-Aml-001450	Ailuropoda melanoleuca	56.89	3.00e-134	471.00
IUUC-Atr-002514	Amborella trichopoda	80.21	0.00e+00	639.00
IUUC-Apl-003708	Anas platyrhynchos	60.16	3.00e-126	444.00
IUUC-Aca-004611	Anolis carolinensis	59.89	4.00e-126	444.00
IUUC-Aly-005622	Arabidopsis lyrata	76.72	8.00e-178	616.00
IUUC-Ath-007137	Arabidopsis thaliana	80.16	2.00e-176	611.00
IUUC-Ago-007869	Ashbya gossypii	28.12	2.00e-30	125.00
IUUC-Ame-011601	Astyanax mexicanus	59.67	1.00e-127	449.00
IUUC-Bta-013202	Bos taurus	57.39	4.00e-135	473.00
IUUC-Bdi-014315	Brachypodium distachyon	75.70	1.00e-173	601.00
IUUC-Bol-016277	Brassica oleracea	74.02	1.00e-179	622.00
IUUC-Bra-016944	Brassica rapa	74.02	6.00e-180	623.00
IUUC-Cja-019281	Callithrix jacchus	60.71	3.00e-134	471.00
IUUC-Cfa-020029	Canis familiaris	60.16	2.00e-126	445.00
IUUC-Cpo-021682	Cavia porcellus	57.39	1.00e-134	471.00
IUUC-Cre-022979	Chlamydomonas reinhardtii	60.99	2.00e-127	448.00
IUUC-Csa-024075	Chlorocebus sabaeus	60.16	2.00e-126	445.00
IUUC-Cin-025704	Ciona intestinalis	57.07	5.00e-131	460.00
IUUC-Csv-026257	Ciona savignyi	57.03	7.00e-129	453.00
IUUC-Cne-026946	Cryptococcus neoformans	32.17	4.00e-27	115.00
IUUC-Cme-027258	Cyanidioschyzon merolae	43.78	9.00e-93	333.00
IUUC-Dre-027906	Danio rerio	59.67	4.00e-127	447.00
IUUC-Dno-029196	Dasypus novemcinctus	60.16	1.00e-126	445.00
IUUC-Dor-030732	Dipodomys ordii	59.78	2.00e-122	431.00
IUUC-Dme-031939	Drosophila melanogaster	58.36	9.00e-123	433.00
IUUC-Ete-033150	Echinops telfairi	59.21	3.00e-111	394.00
IUUC-Eca-033897	Equus caballus	56.89	4.00e-134	470.00
IUUC-Eeu-034952	Erinaceus europaeus	52.50	6.00e-104	370.00
IUUC-Fca-036462	Felis catus	56.89	5.00e-134	470.00
IUUC-Fal-037388	Ficedula albicollis	55.50	4.00e-134	470.00
IUUC-Gmo-038870	Gadus morhua	59.07	3.00e-130	457.00
IUUC-Gga-040671	Gallus gallus	55.50	4.00e-134	470.00
IUUC-Gac-041844	Gasterosteus aculeatus	60.16	1.00e-133	469.00
IUUC-Gma-043383	Glycine max	84.54	0.00e+00	731.00
IUUC-Ggo-045373	Gorilla gorilla	59.26	2.00e-134	471.00
IUUC-Hsa-045841	Homo sapiens	59.26	2.00e-134	471.00
IUUC-Itr-048236	Ictidomys tridecemlineatus	58.73	6.00e-133	466.00
IUUC-Kpa-049338	Komagataella pastoris	28.90	5.00e-31	128.00
IUUC-Lch-050535	Latimeria chalumnae	57.14	8.00e-134	469.00
IUUC-Lpe-051084	Leersia perrieri	75.50	5.00e-175	606.00
IUUC-Loc-052030	Lepisosteus oculatus	60.44	6.00e-134	469.00
IUUC-Laf-054071	Loxodonta africana	55.26	1.00e-133	468.00
IUUC-Mcc-055203	Macaca mulatta	60.16	2.00e-126	444.00
IUUC-Meu-056563	Macropus eugenii	65.40	1.00e-88	319.00
IUUC-Mtr-058624	Medicago truncatula	69.01	0.00e+00	801.00
IUUC-Mga-059895	Meleagris gallopavo	55.50	4.00e-134	470.00
IUUC-Mvi-060557	Microbotryum violaceum	38.18	1.00e-72	267.00
IUUC-Mmr-061286	Microcebus murinus	56.89	7.00e-134	469.00
IUUC-Mdo-062078	Monodelphis domestica	60.44	4.00e-127	447.00
IUUC-Mmu-063447	Mus musculus	57.14	1.00e-134	472.00
IUUC-Mac-065508	Musa acuminata	61.44	1.00e-102	365.00
IUUC-Mpu-066741	Mustela putorius furo	60.16	2.00e-126	445.00
IUUC-Mlu-068152	Myotis lucifugus	60.16	1.00e-126	445.00
IUUC-Nle-069151	Nomascus leucogenys	59.26	1.00e-134	472.00
IUUC-Opr-070277	Ochotona princeps	50.00	3.00e-93	335.00
IUUC-Ont-071569	Oreochromis niloticus	60.16	4.00e-134	470.00
IUUC-Oan-073562	Ornithorhynchus anatinus	57.14	1.00e-134	472.00
IUUC-Ocu-074280	Oryctolagus cuniculus	60.16	1.00e-126	445.00
IUUC-Obr-076718	Oryza brachyantha	78.31	1.00e-173	602.00
IUUC-Oin-079515	Oryza indica	55.49	9.00e-93	333.00
IUUC-Olo-080427	Oryza longistaminata	73.58	1.00e-163	569.00
IUUC-Opu-083505	Oryza punctata	71.29	7.00e-165	572.00
IUUC-Oru-085276	Oryza rufipogon	75.25	2.00e-175	608.00
IUUC-Ola-087365	Oryzias latipes	59.62	1.00e-132	465.00
IUUC-Olu-087589	Ostreococcus lucimarinus	62.86	1.00e-143	502.00
IUUC-Oga-088357	Otolemur garnettii	57.97	1.00e-116	412.00
IUUC-Oar-089506	Ovis aries	57.14	1.00e-134	472.00
IUUC-Ptr-091532	Pan troglodytes	60.16	2.00e-126	445.00
IUUC-Pan-091927	Papio anubis	60.16	2.00e-126	445.00
IUUC-Psi-093358	Pelodiscus sinensis	57.14	1.00e-134	472.00
IUUC-Pma-094105	Petromyzon marinus	55.97	4.00e-37	147.00
IUUC-Ppa-095868	Physcomitrella patens	73.94	4.00e-163	566.00
IUUC-Pfo-096158	Poecilia formosa	59.89	2.00e-133	468.00
IUUC-Pab-098705	Pongo abelii	60.16	2.00e-126	445.00
IUUC-Pop-098989	Populus trichocarpa	90.21	0.00e+00	701.00
IUUC-Pca-100256	Procavia capensis	59.44	3.00e-123	434.00
IUUC-Ppe-101572	Prunus persica	78.02	3.00e-174	603.00
IUUC-Pva-102616	Pteropus vampyrus	59.78	4.00e-123	434.00
IUUC-Rno-105857	Rattus norvegicus	57.14	1.00e-134	472.00
IUUC-Sce-106132	Saccharomyces cerevisiae	24.67	4.00e-32	132.00
IUUC-Sha-107326	Sarcophilus harrisii	56.89	3.00e-134	471.00
IUUC-Smo-109301	Selaginella moellendorffii	72.93	5.00e-161	560.00
IUUC-Sit-110710	Setaria italica	75.50	0.00e+00	626.00
IUUC-Sly-111336	Solanum lycopersicum	75.97	2.00e-180	624.00
IUUC-Stu-112786	Solanum tuberosum	65.76	1.00e-156	545.00
IUUC-Sar-112971	Sorex araneus	52.91	4.00e-114	404.00
IUUC-Sbi-114420	Sorghum bicolor	75.25	0.00e+00	629.00
IUUC-Sre-115175	Sporisorium reilianum	42.74	1.00e-55	211.00
IUUC-Ssc-115646	Sus scrofa	56.89	2.00e-134	471.00
IUUC-Tgu-116898	Taeniopygia guttata	56.64	9.00e-134	469.00
IUUC-Tru-118254	Takifugu rubripes	59.89	3.00e-133	467.00
IUUC-Tsy-118853	Tarsius syrichta	46.73	2.00e-96	345.00
IUUC-Tni-119986	Tetraodon nigroviridis	60.16	1.00e-132	465.00
IUUC-Tca-121739	Theobroma cacao	80.82	0.00e+00	699.00
IUUC-Tae-125368	Triticum aestivum	77.27	2.00e-176	611.00
IUUC-Tur-126856	Triticum urartu	76.62	8.00e-92	330.00
IUUC-Tme-127126	Tuber melanosporum	36.31	2.00e-51	195.00
IUUC-Tbe-127767	Tupaia belangeri	61.02	1.00e-110	391.00
IUUC-Ttr-128826	Tursiops truncatus	56.98	1.00e-118	419.00
IUUC-Uma-129469	Ustilago maydis	42.29	9.00e-56	211.00
IUUC-Vpa-130768	Vicugna pacos	59.44	3.00e-123	434.00
IUUC-Xtr-132842	Xenopus tropicalis	57.58	6.00e-119	420.00
IUUC-Xma-134020	Xiphophorus maculatus	59.89	2.00e-133	468.00
IUUC-Yli-134648	Yarrowia lipolytica	29.27	3.00e-41	162.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence