iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121229

Ensembl Protein ID

EOX92971

UniProt Accession

A0A061DLK8; A0A061DLK8_THECC

Genbank Protein ID

EOX92971.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001879

Gene Name

TCM_001828

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_001828	EOX92971	EOX92971

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-11	44.2	384	417

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           + v++laf +d + l+s+++Dg+++ WDlrt ++
   Q: 384  GTVRSLAFaDDgKQLLSSGGDGQVYHWDLRTRTC 417
           68*******88899***************99766 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSLISQNPVS RNRVKAKRDD GPSIHEDNKD IDNGLESDSE VSRLKKRRKE KEKQIEMEQE 60
KEIKKLENFL FGSIYSPVEF GKAGEENAQV VAQDGSTLFF LDRSVNNLEL PEESDDEEKN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACATGATG GATATATATA AGTTAAAGCA TTACTATTTT AGTTTTTGAT AAAATTAAGT 60
GATGTTATTG TGTTTCTATA AAAAAAATTA TAAAATTATA TTATAGAGCC TTATTCTATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000184	Aegilops tauschii	64.74	0.00e+00	662.00
IUUC-Aml-002252	Ailuropoda melanoleuca	38.56	3.00e-77	281.00
IUUC-Atr-002575	Amborella trichopoda	60.67	0.00e+00	696.00
IUUC-Aly-006512	Arabidopsis lyrata	68.28	0.00e+00	664.00
IUUC-Ath-007244	Arabidopsis thaliana	67.19	0.00e+00	672.00
IUUC-Ago-007895	Ashbya gossypii	29.91	3.00e-48	185.00
IUUC-Acl-008343	Aspergillus clavatus	25.96	2.00e-47	183.00
IUUC-Afl-008445	Aspergillus flavus	28.45	2.00e-53	202.00
IUUC-Aor-009986	Aspergillus oryzae	28.66	8.00e-53	201.00
IUUC-Ame-011338	Astyanax mexicanus	40.73	3.00e-75	275.00
IUUC-Bgr-012201	Blumeria graminis	28.97	4.00e-51	195.00
IUUC-Bta-013058	Bos taurus	39.12	3.00e-81	295.00
IUUC-Bci-013619	Botrytis cinerea	27.68	2.00e-51	196.00
IUUC-Bdi-014771	Brachypodium distachyon	57.97	4.00e-180	623.00
IUUC-Bol-015230	Brassica oleracea	65.74	2.00e-177	614.00
IUUC-Bra-017041	Brassica rapa	64.16	3.00e-172	597.00
IUUC-Cel-018293	Caenorhabditis elegans	26.13	4.00e-45	174.00
IUUC-Cja-019503	Callithrix jacchus	43.94	3.00e-79	288.00
IUUC-Cfa-020743	Canis familiaris	38.56	4.00e-79	288.00
IUUC-Cpo-021488	Cavia porcellus	43.64	1.00e-76	280.00
IUUC-Cre-022926	Chlamydomonas reinhardtii	39.53	1.00e-90	326.00
IUUC-Csa-023110	Chlorocebus sabaeus	43.64	1.00e-77	283.00
IUUC-Cin-025208	Ciona intestinalis	37.09	6.00e-68	250.00
IUUC-Cme-027351	Cyanidioschyzon merolae	30.75	8.00e-54	204.00
IUUC-Dre-027524	Danio rerio	31.95	9.00e-66	243.00
IUUC-Dno-029243	Dasypus novemcinctus	38.90	3.00e-76	278.00
IUUC-Dor-030110	Dipodomys ordii	45.02	1.00e-76	279.00
IUUC-Dse-031217	Dothistroma septosporum	29.87	1.00e-49	190.00
IUUC-Dme-031999	Drosophila melanogaster	30.00	4.00e-49	188.00
IUUC-Eca-034350	Equus caballus	38.90	2.00e-77	282.00
IUUC-Eeu-034991	Erinaceus europaeus	43.09	6.00e-74	271.00
IUUC-Fal-036614	Ficedula albicollis	42.42	2.00e-73	269.00
IUUC-Gmo-039183	Gadus morhua	38.86	1.00e-72	266.00
IUUC-Gga-040922	Gallus gallus	39.04	6.00e-80	290.00
IUUC-Gac-041475	Gasterosteus aculeatus	36.18	8.00e-70	256.00
IUUC-Gma-043598	Glycine max	70.19	0.00e+00	783.00
IUUC-Ggo-044517	Gorilla gorilla	44.24	3.00e-79	288.00
IUUC-Hsa-045741	Homo sapiens	44.24	5.00e-79	287.00
IUUC-Hvu-047463	Hordeum vulgare	67.24	8.00e-66	241.00
IUUC-Itr-048128	Ictidomys tridecemlineatus	38.21	6.00e-80	290.00
IUUC-Kpa-049335	Komagataella pastoris	33.57	8.00e-57	213.00
IUUC-Lch-049816	Latimeria chalumnae	42.65	5.00e-79	287.00
IUUC-Lpe-051140	Leersia perrieri	61.52	0.00e+00	639.00
IUUC-Loc-051942	Lepisosteus oculatus	38.68	7.00e-72	263.00
IUUC-Laf-054245	Loxodonta africana	40.09	4.00e-79	288.00
IUUC-Meu-056300	Macropus eugenii	38.18	4.00e-64	237.00
IUUC-Mor-057184	Magnaporthe oryzae	27.96	2.00e-41	163.00
IUUC-Mtr-058019	Medicago truncatula	67.57	0.00e+00	733.00
IUUC-Mga-060179	Meleagris gallopavo	41.83	6.00e-77	280.00
IUUC-Mvi-060435	Microbotryum violaceum	37.94	2.00e-61	229.00
IUUC-Mdo-062187	Monodelphis domestica	42.77	6.00e-75	274.00
IUUC-Mmu-063386	Mus musculus	37.56	3.00e-77	281.00
IUUC-Mpu-066084	Mustela putorius furo	43.98	1.00e-77	283.00
IUUC-Mlu-068130	Myotis lucifugus	42.42	2.00e-75	275.00
IUUC-Nle-069743	Nomascus leucogenys	38.46	1.00e-64	239.00
IUUC-Opr-071111	Ochotona princeps	43.77	3.00e-78	285.00
IUUC-Ont-071979	Oreochromis niloticus	35.83	3.00e-74	271.00
IUUC-Ocu-073754	Oryctolagus cuniculus	38.51	2.00e-80	292.00
IUUC-Oba-075007	Oryza barthii	64.31	0.00e+00	629.00
IUUC-Obr-076447	Oryza brachyantha	59.27	0.00e+00	641.00
IUUC-Ogl-077733	Oryza glaberrima	64.31	0.00e+00	629.00
IUUC-Ogu-078828	Oryza glumaepatula	64.31	0.00e+00	630.00
IUUC-Oin-080152	Oryza indica	64.11	0.00e+00	630.00
IUUC-Olo-080983	Oryza longistaminata	63.51	2.00e-180	624.00
IUUC-Oni-082443	Oryza nivara	64.11	0.00e+00	629.00
IUUC-Opu-083771	Oryza punctata	62.50	2.00e-177	614.00
IUUC-Oru-084272	Oryza rufipogon	64.11	0.00e+00	629.00
IUUC-Osa-085885	Oryza sativa	64.31	0.00e+00	633.00
IUUC-Olu-087644	Ostreococcus lucimarinus	26.93	4.00e-33	134.00
IUUC-Oga-088834	Otolemur garnettii	39.78	6.00e-80	290.00
IUUC-Oar-089712	Ovis aries	38.77	1.00e-80	292.00
IUUC-Pan-092561	Papio anubis	43.64	4.00e-77	281.00
IUUC-Ppa-095397	Physcomitrella patens	53.05	2.00e-130	458.00
IUUC-Pfo-097068	Poecilia formosa	35.24	5.00e-73	267.00
IUUC-Pop-099471	Populus trichocarpa	72.77	0.00e+00	757.00
IUUC-Ppe-101684	Prunus persica	75.59	0.00e+00	827.00
IUUC-Pva-102851	Pteropus vampyrus	41.95	5.00e-71	261.00
IUUC-Pgr-103370	Puccinia graminis	34.27	1.00e-62	233.00
IUUC-Ptt-103838	Puccinia triticina	31.45	2.00e-54	206.00
IUUC-Rno-104910	Rattus norvegicus	38.67	2.00e-77	282.00
IUUC-Sce-106258	Saccharomyces cerevisiae	32.43	8.00e-54	204.00
IUUC-Sja-107746	Schizosaccharomyces japonicus	31.76	3.00e-69	255.00
IUUC-Spo-108268	Schizosaccharomyces pombe	35.29	2.00e-77	282.00
IUUC-Smo-108815	Selaginella moellendorffii	51.20	1.00e-140	491.00
IUUC-Sit-109706	Setaria italica	60.52	0.00e+00	664.00
IUUC-Sly-111533	Solanum lycopersicum	69.80	0.00e+00	707.00
IUUC-Stu-112853	Solanum tuberosum	71.17	0.00e+00	721.00
IUUC-Sbi-114747	Sorghum bicolor	61.01	0.00e+00	676.00
IUUC-Ssc-115916	Sus scrofa	38.34	3.00e-78	285.00
IUUC-Tgu-117291	Taeniopygia guttata	41.21	1.00e-72	266.00
IUUC-Tru-118724	Takifugu rubripes	39.64	4.00e-74	271.00
IUUC-Tsy-118928	Tarsius syrichta	47.44	2.00e-53	202.00
IUUC-Tae-123598	Triticum aestivum	60.00	0.00e+00	671.00
IUUC-Tur-126082	Triticum urartu	53.19	7.00e-106	376.00
IUUC-Ttr-128904	Tursiops truncatus	43.93	7.00e-65	240.00
IUUC-Vpa-130817	Vicugna pacos	39.22	1.00e-79	290.00
IUUC-Vvi-131395	Vitis vinifera	75.04	0.00e+00	842.00
IUUC-Xtr-132971	Xenopus tropicalis	40.37	6.00e-85	307.00
IUUC-Xma-133391	Xiphophorus maculatus	35.10	4.00e-72	264.00
IUUC-Yli-134613	Yarrowia lipolytica	30.49	6.00e-56	211.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence