iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131083

Ensembl Protein ID

VIT_08s0007g00240.t01

UniProt Accession

F6HLD0; F6HLD0_VITVI

Genbank Protein ID

CCB55594.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595991

Gene Name

VIT_08s0007g00240

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_08s0007g00240	VIT_08s0007g00240.t01	VIT_08s0007g00240.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-22	77.8	34	71

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikvWDlrtgvllk 37
           gH d+v +l++s+  ll+s+s D+t+++WD+ t  +lk
   Q: 34   GHLDDVLDLSWSGsQLLLSSSMDKTVRLWDMETKSCLK 71
           8**********5559****************9999986 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSSSSRKGHS IPDYIHMPET VFSLLEIPVC SFKGHLDDVL DLSWSGSQLL LSSSMDKTVR 60
LWDMETKSCL KLFAHNDYVT CIQFNPMDDK YFISGSLDAK VRIWSIPDRQ VVDWTDLHEM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCATCTA GCAGTAGAAA AGGCCATTCA ATTCCCGACT ACATCCACAT GCCAGAAACT 60
GTTTTCTCAC TGTTGGAGAT ACCAGTTTGT TCTTTCAAAG GCCATCTGGA TGATGTCTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014090	Brachypodium distachyon	62.55	2.00e-91	329.00
IUUC-Bra-017887	Brassica rapa	58.72	3.00e-133	468.00
IUUC-Cre-022638	Chlamydomonas reinhardtii	32.53	7.00e-19	86.70
IUUC-Fox-037744	Fusarium oxysporum	40.10	4.00e-38	150.00
IUUC-Lpe-051504	Leersia perrieri	51.85	2.00e-100	359.00
IUUC-Mtr-057965	Medicago truncatula	55.28	9.00e-129	454.00
IUUC-Ogu-078960	Oryza glumaepatula	52.87	1.00e-105	376.00
IUUC-Olo-081008	Oryza longistaminata	71.35	2.00e-81	295.00
IUUC-Oni-083068	Oryza nivara	53.69	2.00e-106	379.00
IUUC-Olu-087651	Ostreococcus lucimarinus	46.32	2.00e-52	197.00
IUUC-Ppa-095727	Physcomitrella patens	54.18	1.00e-75	277.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence