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Tag Content
iUUCD ID IUUC-Itr-048420
Ensembl Protein ID ENSSTOP00000003444.2
UniProt Accession I3M339; I3M339_ICTTR
Genbank Protein ID ENSSTOP00000003444
Protein Name Presenilin
Genbank Nucleotide ID AGTP01020439
Gene Name PSEN1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSTOG00000003845.2 ENSSTOT00000003841.2 ENSSTOP00000003444.2
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/Alpha-Helix/CUE 1.30e-07 31.5 127 163
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/CUE

   S: 2    letaleqLkeiFPnldysviqvvLeantgsleaavnn 38
    +eta+e+++++FP+l+ys+++ +L++++ +++a+ +
   Q: 127 VETAQERNETLFPALIYSSTMMWLVNMAEGDPEAQRR 163
    89**************************999999876 PP
   

Organism Ictidomys tridecemlineatus
Functional Description
(View)

Functional Description



     Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.
Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.
Protein Sequence
(Fasta)
MTILLVVLYK YRCYKVIHAW LIISSLLLLF FFSFIYLGEV FKTYNVAVDY ITVALLIWNF 60
GVVGMISIHW KGPLRLQQAY LIMISALMAL VFIKYLPEWT AWLILAVISV YDLVAVLCPK 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Itr-048420|UBD,CUE|Ictidomys tridecemlineatus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TGATCGTCGA AGACCTGGGA ACCCTGAGCC GGTATCTAAT GGCCGACCGC AGGGTAACTC 60
ACGGCAGGTG GTGGAGCAAG ATGAGGAAGA GGATGAGGAG CTGACACTGA AATACGGCGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Itr-048420|UBD,CUE|Ictidomys tridecemlineatus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0256--Endoplasmic reticulum
KW-0333--Golgi apparatus
KW-0378--Hydrolase
KW-0472--Membrane
KW-0914--Notch signaling pathway
KW-0645--Protease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR002031--Pept_A22A_PS1
IPR001108--Peptidase_A22A
IPR006639--Preselin/SPP

Pfam

PF01080--Presenilin

PRINTS

PR01072--PRESENILIN

SMART

SM00730--PSN

Gene Ontology

GO:0016235--C:aggresome
GO:0030424--C:axon
GO:0005938--C:cell cortex
GO:0030054--C:cell junction
GO:0005813--C:centrosome
GO:0035253--C:ciliary rootlet
GO:0031410--C:cytoplasmic vesicle
GO:0043198--C:dendritic shaft
GO:0005789--C:endoplasmic reticulum membrane
GO:0070765--C:gamma-secretase complex
GO:0000139--C:Golgi membrane
GO:0030426--C:growth cone
GO:0005887--C:integral component of plasma membrane
GO:0000776--C:kinetochore
GO:0045121--C:membrane raft
GO:0005739--C:mitochondrion
GO:0043025--C:neuronal cell body
GO:0005640--C:nuclear outer membrane
GO:0098793--C:presynapse
GO:0005791--C:rough endoplasmic reticulum
GO:0005790--C:smooth endoplasmic reticulum
GO:0042500--F:aspartic endopeptidase activity, intramembrane cleaving
GO:0005262--F:calcium channel activity
GO:0000186--P:activation of MAPKK activity
GO:0000045--P:autophagosome assembly
GO:0034205--P:beta-amyloid formation
GO:0001568--P:blood vessel development
GO:0048854--P:brain morphogenesis
GO:0021870--P:Cajal-Retzius cell differentiation
GO:0001708--P:cell fate specification
GO:0006974--P:cellular response to DNA damage stimulus
GO:0021795--P:cerebral cortex cell migration
GO:0015871--P:choline transport
GO:0021904--P:dorsal/ventral neural tube patterning
GO:0030326--P:embryonic limb morphogenesis
GO:0050673--P:epithelial cell proliferation
GO:0001947--P:heart looping
GO:0002244--P:hematopoietic progenitor cell differentiation
GO:0035556--P:intracellular signal transduction
GO:0015813--P:L-glutamate transport
GO:0006509--P:membrane protein ectodomain proteolysis
GO:0007613--P:memory
GO:0006839--P:mitochondrial transport
GO:0043011--P:myeloid dendritic cell differentiation
GO:2001234--P:negative regulation of apoptotic signaling pathway
GO:0050771--P:negative regulation of axonogenesis
GO:0007175--P:negative regulation of epidermal growth factor-activated receptor activity
GO:2000059--P:negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0051444--P:negative regulation of ubiquitin-protein transferase activity
GO:0051402--P:neuron apoptotic process
GO:0048666--P:neuron development
GO:0001764--P:neuron migration
GO:0007220--P:Notch receptor processing
GO:0007219--P:Notch signaling pathway
GO:0043065--P:positive regulation of apoptotic process
GO:0050820--P:positive regulation of coagulation
GO:0060999--P:positive regulation of dendritic spine development
GO:0043406--P:positive regulation of MAP kinase activity
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0001921--P:positive regulation of receptor recycling
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0009791--P:post-embryonic development
GO:0006486--P:protein glycosylation
GO:0016485--P:protein processing
GO:0015031--P:protein transport
GO:0060828--P:regulation of canonical Wnt signaling pathway
GO:0043393--P:regulation of protein binding
GO:0060075--P:regulation of resting membrane potential
GO:0048167--P:regulation of synaptic plasticity
GO:0051966--P:regulation of synaptic transmission, glutamatergic
GO:0006979--P:response to oxidative stress
GO:0016337--P:single organismal cell-cell adhesion
GO:0048705--P:skeletal system morphogenesis
GO:0043589--P:skin morphogenesis
GO:0051563--P:smooth endoplasmic reticulum calcium ion homeostasis
GO:0001756--P:somitogenesis
GO:0016080--P:synaptic vesicle targeting
GO:0002286--P:T cell activation involved in immune response
GO:0050852--P:T cell receptor signaling pathway
GO:0048538--P:thymus development

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000686 Aegilops tauschii 34.75 2.00e-25 110.00
IUUC-Aml-001648 Ailuropoda melanoleuca 90.15 3.00e-148 517.00
IUUC-Atr-003039 Amborella trichopoda 34.68 3.00e-32 132.00
IUUC-Apl-003727 Anas platyrhynchos 86.35 3.00e-136 478.00
IUUC-Aca-004582 Anolis carolinensis 85.03 1.00e-137 482.00
IUUC-Aly-005455 Arabidopsis lyrata 58.82 2.00e-17 83.60
IUUC-Bta-013026 Bos taurus 90.12 2.00e-149 521.00
IUUC-Bdi-014196 Brachypodium distachyon 33.52 1.00e-30 127.00
IUUC-Bol-015841 Brassica oleracea 35.26 1.00e-31 130.00
IUUC-Bra-017580 Brassica rapa 53.92 9.00e-18 84.30
IUUC-Cja-019994 Callithrix jacchus 96.50 3.00e-154 538.00
IUUC-Cfa-020074 Canis familiaris 93.95 7.00e-152 530.00
IUUC-Cpo-022237 Cavia porcellus 95.86 2.00e-154 538.00
IUUC-Csa-023537 Chlorocebus sabaeus 96.82 2.00e-156 545.00
IUUC-Cho-024735 Choloepus hoffmanni 88.73 1.00e-133 469.00
IUUC-Dno-029758 Dasypus novemcinctus 93.31 6.00e-151 526.00
IUUC-Dor-030609 Dipodomys ordii 79.15 1.00e-125 442.00
IUUC-Dme-031929 Drosophila melanogaster 55.98 1.00e-86 313.00
IUUC-Ete-032487 Echinops telfairi 82.86 1.00e-82 300.00
IUUC-Eca-033391 Equus caballus 73.16 2.00e-126 444.00
IUUC-Eeu-035134 Erinaceus europaeus 90.88 2.00e-142 497.00
IUUC-Fca-036243 Felis catus 94.27 2.00e-151 528.00
IUUC-Fal-036600 Ficedula albicollis 86.94 4.00e-137 481.00
IUUC-Gga-040993 Gallus gallus 87.26 5.00e-139 487.00
IUUC-Gac-042342 Gasterosteus aculeatus 70.40 8.00e-98 350.00
IUUC-Gma-043822 Glycine max 39.47 9.00e-25 107.00
IUUC-Ggo-044859 Gorilla gorilla 95.52 3.00e-116 411.00
IUUC-Hsa-046822 Homo sapiens 96.82 1.00e-156 545.00
IUUC-Hvu-047141 Hordeum vulgare 36.93 5.00e-27 115.00
IUUC-Lpe-051132 Leersia perrieri 33.51 8.00e-30 124.00
IUUC-Laf-053979 Loxodonta africana 88.89 6.00e-136 476.00
IUUC-Mcc-055682 Macaca mulatta 96.82 1.00e-156 545.00
IUUC-Meu-056004 Macropus eugenii 69.75 8.00e-111 393.00
IUUC-Mtr-058392 Medicago truncatula 33.73 9.00e-28 117.00
IUUC-Mga-059466 Meleagris gallopavo 86.94 2.00e-138 485.00
IUUC-Mmr-061538 Microcebus murinus 70.38 1.00e-96 346.00
IUUC-Mdo-062122 Monodelphis domestica 88.89 5.00e-143 500.00
IUUC-Mmu-063176 Mus musculus 94.59 6.00e-147 513.00
IUUC-Mpu-065927 Mustela putorius furo 93.63 2.00e-151 528.00
IUUC-Mlu-067079 Myotis lucifugus 92.86 5.00e-154 537.00
IUUC-Nle-070180 Nomascus leucogenys 96.82 1.00e-156 545.00
IUUC-Opr-070847 Ochotona princeps 86.35 8.00e-132 463.00
IUUC-Oan-072783 Ornithorhynchus anatinus 86.73 1.00e-132 465.00
IUUC-Ocu-074527 Oryctolagus cuniculus 94.60 9.00e-153 533.00
IUUC-Oba-075256 Oryza barthii 32.93 3.00e-28 119.00
IUUC-Ogl-077097 Oryza glaberrima 32.04 6.00e-29 121.00
IUUC-Ogu-078570 Oryza glumaepatula 32.04 7.00e-29 121.00
IUUC-Oin-079244 Oryza indica 32.04 9.00e-29 120.00
IUUC-Olo-080484 Oryza longistaminata 34.72 9.00e-24 103.00
IUUC-Ome-081814 Oryza meridionalis 32.24 1.00e-29 124.00
IUUC-Oni-082057 Oryza nivara 32.04 1.00e-28 120.00
IUUC-Opu-084176 Oryza punctata 32.33 2.00e-28 120.00
IUUC-Oru-084618 Oryza rufipogon 32.04 9.00e-29 120.00
IUUC-Osa-085602 Oryza sativa 32.96 2.00e-28 119.00
IUUC-Oar-090348 Ovis aries 93.10 7.00e-154 536.00
IUUC-Ptr-091060 Pan troglodytes 96.82 1.00e-156 545.00
IUUC-Psi-093505 Pelodiscus sinensis 86.94 4.00e-139 487.00
IUUC-Pab-098591 Pongo abelii 96.82 2.00e-156 545.00
IUUC-Pop-099661 Populus trichocarpa 34.71 5.00e-30 124.00
IUUC-Pca-101029 Procavia capensis 89.81 9.00e-142 496.00
IUUC-Ppe-101495 Prunus persica 35.17 4.00e-33 135.00
IUUC-Pva-102244 Pteropus vampyrus 85.40 2.00e-131 462.00
IUUC-Rno-105861 Rattus norvegicus 93.97 3.00e-142 498.00
IUUC-Sha-107045 Sarcophilus harrisii 88.57 3.00e-141 494.00
IUUC-Smo-109325 Selaginella moellendorffii 37.94 3.00e-37 149.00
IUUC-Sit-110624 Setaria italica 34.89 9.00e-27 114.00
IUUC-Stu-112433 Solanum tuberosum 37.38 2.00e-29 122.00
IUUC-Sar-113169 Sorex araneus 89.29 7.00e-128 450.00
IUUC-Sbi-114305 Sorghum bicolor 33.86 2.00e-27 116.00
IUUC-Ssc-115766 Sus scrofa 92.68 2.00e-148 518.00
IUUC-Tgu-116469 Taeniopygia guttata 86.62 5.00e-136 476.00
IUUC-Tsy-119624 Tarsius syrichta 80.06 2.00e-123 436.00
IUUC-Tca-121865 Theobroma cacao 34.72 4.00e-34 138.00
IUUC-Tae-125925 Triticum aestivum 35.97 1.00e-27 117.00
IUUC-Tur-126237 Triticum urartu 35.08 2.00e-26 113.00
IUUC-Tbe-128148 Tupaia belangeri 86.10 3.00e-111 394.00
IUUC-Ttr-128793 Tursiops truncatus 93.63 5.00e-150 523.00
IUUC-Vpa-130625 Vicugna pacos 84.69 1.00e-124 439.00
IUUC-Vvi-131312 Vitis vinifera 36.01 4.00e-32 132.00
Created Date 25-Jun-2017

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