iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135784

Ensembl Protein ID

Zm00001d028769_T001

UniProt Accession

A0A1D6JZH5; A0A1D6JZH5_MAIZE

Genbank Protein ID

ONL96993.1; ONL96997.1

Protein Name

Tetratricopeptide repeat (TPR)-containing protein

Genbank Nucleotide ID

CM007647; CM007647

Gene Name

ZEAMMB73_Zm00001d028769

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d028769	Zm00001d028769_T001	Zm00001d028769_T001
Zm00001d028769	Zm00001d028769_T002	Zm00001d028769_T002
Zm00001d028769	Zm00001d028769_T005	Zm00001d028769_T005

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	3.30e-08	35.8	257	323

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 2    DvilvvggeeffahkivLaasSsvFyalflmeleesksklmveik.d.vqpevfrallkFlYtgklde 67
           D  +++g+ee+ + ++ +aa S++++ l+++++ e + +++++++ d + p  +ra+  ++++g++d 
   Q: 257  DLWFIIGEEEVACERSCIAALSKPLNTLLYGGFAEAH-RDRIDFSrDgITPRGMRAVSAYSRHGRVDD 323
           7789********************************9.*******989*****************995 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MTNNFLTTIK SLKLIEGCKA AQLYALSSVG AASTSGSGDA GGSSNGKPQP PPPPKTISMR 60
SGSLYYPHAA PSTSGAFVPE PHLPCGLPVA DALEPALDAC LRPVDHVGVL AASYRRVSAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCGCCCCCC GCAACCAACG GCATTACACA GGTCACGCCT GGGTGCACGG CGGGGACGCG 60
CGGCCGGGCG GGAGGGCGGG GGCGACGCGC GCGCACCAGC CGTTCCGCCG GAGAACTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027363--M1Pi_N
IPR011333--SKP1/BTB/POZ
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat

PROSITE

PS50293--TPR_REGION

Pfam

PF13176--TPR_7

SMART

SM00028--TPR

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002845	Amborella trichopoda	56.65	0.00e+00	1039.00
IUUC-Aly-005576	Arabidopsis lyrata	56.40	0.00e+00	1040.00
IUUC-Ath-006936	Arabidopsis thaliana	56.11	0.00e+00	1043.00
IUUC-Bdi-014047	Brachypodium distachyon	78.51	0.00e+00	1389.00
IUUC-Bol-016063	Brassica oleracea	55.95	0.00e+00	1031.00
IUUC-Bra-017816	Brassica rapa	55.20	0.00e+00	999.00
IUUC-Dse-031204	Dothistroma septosporum	20.00	5.00e-01	27.30
IUUC-Gma-044270	Glycine max	55.79	0.00e+00	1026.00
IUUC-Hvu-047550	Hordeum vulgare	80.73	0.00e+00	1066.00
IUUC-Lpe-051183	Leersia perrieri	78.20	0.00e+00	1385.00
IUUC-Mtr-058783	Medicago truncatula	54.67	0.00e+00	970.00
IUUC-Mac-065198	Musa acuminata	62.23	0.00e+00	1122.00
IUUC-Oba-075522	Oryza barthii	80.76	0.00e+00	1229.00
IUUC-Obr-076036	Oryza brachyantha	82.01	0.00e+00	1236.00
IUUC-Ogl-077017	Oryza glaberrima	80.58	0.00e+00	1409.00
IUUC-Ogu-078743	Oryza glumaepatula	79.96	0.00e+00	1395.00
IUUC-Oin-079854	Oryza indica	83.61	0.00e+00	1226.00
IUUC-Olo-080413	Oryza longistaminata	82.77	0.00e+00	1208.00
IUUC-Ome-081439	Oryza meridionalis	79.65	0.00e+00	1401.00
IUUC-Oni-082214	Oryza nivara	79.96	0.00e+00	1395.00
IUUC-Opu-084166	Oryza punctata	77.29	0.00e+00	936.00
IUUC-Oru-084626	Oryza rufipogon	80.06	0.00e+00	1396.00
IUUC-Pop-100058	Populus trichocarpa	55.06	0.00e+00	1000.00
IUUC-Sit-109882	Setaria italica	89.80	0.00e+00	1570.00
IUUC-Sly-111831	Solanum lycopersicum	55.27	0.00e+00	1004.00
IUUC-Stu-112813	Solanum tuberosum	54.98	0.00e+00	972.00
IUUC-Sbi-114510	Sorghum bicolor	95.25	0.00e+00	1645.00
IUUC-Tca-121236	Theobroma cacao	57.63	0.00e+00	1063.00
IUUC-Tae-122817	Triticum aestivum	76.39	0.00e+00	1344.00
IUUC-Tur-126646	Triticum urartu	81.35	0.00e+00	1171.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence