iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131741

Ensembl Protein ID

VIT_09s0002g04040.t01

UniProt Accession

F6HYD1; F6HYD1_VITVI

Genbank Protein ID

CCB59454.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596494

Gene Name

VIT_09s0002g04040

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_09s0002g04040	VIT_09s0002g04040.t01	VIT_09s0002g04040.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-30	104.2	188	225
UBD/Beta-Prp	9.00e-43	147.1	97	311

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           +H+d ++cla+ ++ +ll +Gs+D+++kvW++ + +++
   Q: 188  QHKDYISCLAYnDGeKLLYTGSWDKSVKVWNIFEKRCV 225
           5**********544899**************8777766 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls....................t 83
           +++  ++++++tgs++++i  w+  + + +  ++  ++ v+a+  + +  il t++ D  i+vwd+s                     
   Q: 97   IAI--SRDFIFTGSESSRIHTWKRPDCTEVGHIKASSPDVRAILAHGR--ILFTTHGDCKIRVWDVSvtekfrpkkittlphrnpffL 180
           444..78899************9999999*************999888..*****************999998888888885544433 PP
   S: 84   gkcvhtlk.....ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl 166
           +            +h+d++ +l+++   + l +Gs+d+ ++vw++ ++ c+   +  h+g +n +v+++++ +++++s D++v++W+ 
   Q: 181  F------PkknshQHKDYISCLAYNDGEKLLYTGSWDKSVKVWNIFEKRCVD-SFVAHEGHINAIVINQQDGCVFTCSSDGAVKIWRR 261
           3......2445557************889999*******************9.*********************************** PP
   S: 167  ktgkllrtl....tgghtdsvysls..fdsngkelvsgsldgtvklwdlqt 211
             g+  + l    +  + ++v+ l+   ++++ +l sgs dg +++wd ++
   Q: 262  VYGESSHILtmtlKF-QLSPVNTLAlsSSPSSCFLYSGSSDGLINFWDKEK 311
           666666666555355.99999999866777779999***********9774 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MEFYGKGNLW NFVEEERRNM HFTRSLSFST DQNVSEPHES PFVSPKASSA SATSIPLSPM 60
SPETPWKLSP MHASPSPSLL YHCLASLHRY EGNVFSIAIS RDFIFTGSES SRIHTWKRPD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCATATCTG CCATTCCTTT TGCTCATCTA CTATGGAGTT CTATGGCAAA GGAAACCTTT 60
GGAACTTCGT TGAAGAAGAA AGGAGGAACA TGCATTTTAC CAGGAGCCTC TCTTTCAGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

vvi:100249690

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence