iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131491

Ensembl Protein ID

VIT_09s0002g04720.t01

UniProt Accession

D7U0L4; D7U0L4_VITVI

Genbank Protein ID

CBI36160.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596494

Gene Name

VIT_09s0002g04720

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_09s0002g04720	VIT_09s0002g04720.t01	VIT_09s0002g04720.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-29	100.8	127	159
UBD/Beta-Prp	6.60e-46	157.4	42	242

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           Htd ++++a  ++ ++++s+sdD  ik+WD+ +
   Q: 127  HTDYIRSVAVhPTlPYVLSASDDMLIKLWDWEK 159
           ***********999****************876 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghed 95
           ++++++++++++p +++++++ ++gt+ +wd++++ l++s++  e++v++ kf+ ++++ +tg++D++i+v++++t   v  +++h+d
   Q: 42   QQSERVKSLDVHPTEPWILASLYSGTVCIWDYHSQELVKSFKVTESPVRSAKFIATKQWVITGADDKFIRVFNYDTMVKVAEFEAHTD 129
           5677899********************************************************************************* PP
   S: 96   svlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtds 182
           +++s++++p+  +++s+s+d  i++wd+e+g++  ++++gh + v+ v+++p++ + + s+slD+t+++W+l++     tl g h + 
   Q: 130  YIRSVAVHPTLPYVLSASDDMLIKLWDWEKGWECAQIFEGHGHYVMQVAFNPKDpSTFSSASLDGTIKIWNLSSPAPDFTLDG-HSKG 216
           *********************************************************************************99.**** PP
   S: 183  vysls..fdsng..kelvsgsldgtvkl 206
           v++++  ++  g  ++l+sgs+d t k+
   Q: 217  VNCIDyfMS--GpkPYLISGSDDHTAKV 242
           *****6444..445**********9886 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MISCVNGIFY PNQWNNYQMS SESSLLASMI CNCFLGQKEQ VQQSERVKSL DVHPTEPWIL 60
ASLYSGTVCI WDYHSQELVK SFKVTESPVR SAKFIATKQW VITGADDKFI RVFNYDTMVK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAGCTATTTA TGATCGTACA CAATTTGTAT CACTAGAGGT ATATACAATA TATCTATGAT 60
TAGCTGCGTC AATGGGATCT TTTATCCTAA TCAGTGGAAC AATTACCAAA TGTCTAGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006891--P:intra-Golgi vesicle-mediated transport
GO:0006886--P:intracellular protein transport
GO:0006890--P:retrograde vesicle-mediated transport, Golgi to ER

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence