iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131060

UUCD1 version

UUC-ViV-00310

Ensembl Protein ID

VIT_09s0002g07020.t01

UniProt Accession

D7U141; D7U141_VITVI

Genbank Protein ID

CBI36337.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596494

Gene Name

WSIP2; VIT_09s0002g07020

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_09s0002g07020	VIT_09s0002g07020.t01	VIT_09s0002g07020.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-20	72.1	467	503
UBD/Beta-Prp	4.10e-40	138.4	360	638

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtgv 34
           H + v++laf  ++  l +++++ D+tikvWD+ tg 
   Q: 467  HIGNVSDLAFsqPNkQLcIITCGEDKTIKVWDVVTGS 503
           8899******996643359**************9996 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfsp.dksllatgsrdgtikvwdvttgkl..................lrsl.sgheaevtavkfspdgkilvtgseDrti 76
           + s +++++f+p + +ll++g   g i++w+v  g                     +sl  +  a v+ v++spdg+i   + + +++
   Q: 360  QGSAVRSMDFHPiQHTLLLVGTNIGDITIWEVGGGARlvlknfkvwdlgscsgtlQASLaNESAASVNRVTWSPDGSICGVAYSKHIV 447
           66778899996636788999999***********9999******8887777777766664444455********************** PP
   S: 77   kvwdlstgkcvhtlk...ghedsvlslsfsp.sg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg..nllvsGsl 157
           +++++  g+ ++      +h  +v +l+fs+ ++   +++ ++d+ti+vwd+ tg++ + t++gh++ v +v+ h ++  + ++s + 
   Q: 448  HIFSYYGGDDLRNHLeieAHIGNVSDLAFSQpNKqLCIITCGEDKTIKVWDVVTGSKQY-TFDGHEAPVYSVCPHYKEniQFIFSTAI 534
           ***9998887764332449999*********96648899********************.************99987757889***** PP
   S: 158  DrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgt....vklwdlqtgecvrtlng.htdnvksvrfspnderlvsg 240
           D++++ W   +     +      +s + ++++s+g++l s+++++     +  w+ ++g + rt++g  ++ v  v+f+  ++r++++
   Q: 535  DGKIKAWLYDNLGSRVDYDA-PGHSCTMMAYSSDGTRLFSCGTNKEgesyIVEWNESEGAVKRTYHGlGKRSVGIVQFDTTKNRFLVA 621
           *******7744444444454.788999999*************98522226667777**********8889***************** PP
   S: 241  ssDgsiriWdlrsgdll 257
           +++  i++Wd+++  +l
   Q: 622  GDEYLIKFWDMDNVSML 638
           *********98775554 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKDTVHRLEK ESGFFFNMRY FEDCVTNGEW DEVENYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKHDH AKAVDILVKD LKTFSTFNEE LFKEITLLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCGC TGAGCAGAGA ACTTGTTTTT CTGATACTTC AGTTCTTGGA TGAAGAGAAA 60
TTCAAGGACA CTGTTCACAG GTAAGGAATT CGTTCTTCAT TCGTTTTTCT TCTTTTTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

vvi:100247343

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006463	Arabidopsis lyrata	75.71	0.00e+00	1693.00
IUUC-Ath-007634	Arabidopsis thaliana	76.16	0.00e+00	1717.00
IUUC-Bol-015812	Brassica oleracea	76.05	0.00e+00	1758.00
IUUC-Bra-016964	Brassica rapa	75.18	0.00e+00	1729.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence