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Tag Content
iUUCD ID IUUC-Tca-121331
Ensembl Protein ID EOY25844
UniProt Accession A0A061GFM4; A0A061GFM4_THECC
Genbank Protein ID EOY25843.1; EOY25844.1
Protein Name Pre-mRNA-processing-splicing factor isoform 1
Genbank Nucleotide ID CM001884; CM001884
Gene Name TCM_027212
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
TCM_027212 EOY25844 EOY25844
TCM_027212 EOY25845 EOY25845
TCM_027212 EOY25846 EOY25846
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
UBD/Jab_MPN 62.08 0.00e+00 2938.00 IUUC-Sce-106157
UBD/Jab_MPN 62.03 0.00e+00 2938.00 IUUC-Ots-000011
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Theobroma cacao
Protein Sequence
(Fasta)
MWNNNNNGAQ IAPPGTGGST IPPPPAAQPS YTVLAPQTTP QEAEAKLEEK ARKWMQLNSK 60
RYGDKRKFGF VETQKEDMPP EHVRKIIRDH GDMSSKKYRH DKRVYLGALK FIPHAVYKLL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Tca-121331|UBD,Jab_MPN|Theobroma cacao
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTGGAACA ACAACAATAA CGGCGCTCAG ATAGCGCCTC CGGGAACTGG GGGATCCACC 60
ATCCCGCCTC CTCCAGCTGC GCAGCCTTCT TACACCGTGC TGGCTCCGCA GACGACTCCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Tca-121331|UBD,Jab_MPN|Theobroma cacao
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR000555--JAMM/MPN+_dom
IPR012591--PRO8NT
IPR012592--PROCN
IPR012984--PROCT
IPR027652--PRP8
IPR021983--PRP8_domainIV
IPR019581--Prp8_U5-snRNA-bd
IPR019580--Prp8_U6-snRNA-bd
IPR012337--RNaseH-like_dom
IPR019582--RRM_spliceosomal_PrP8
Pfam

PF01398--JAB
PF08082--PRO8NT
PF08083--PROCN
PF08084--PROCT
PF12134--PRP8_domainIV
PF10598--RRM_4
PF10597--U5_2-snRNA_bdg
PF10596--U6-snRNA_bdg
SMART

SM00232--JAB_MPN
Gene Ontology

GO:0005681--C:spliceosomal complex
GO:0030623--F:U5 snRNA binding
GO:0017070--F:U6 snRNA binding
GO:0000398--P:mRNA splicing, via spliceosome
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001091 Aegilops tauschii 95.08 0.00e+00 4418.00
IUUC-Aml-002261 Ailuropoda melanoleuca 82.74 0.00e+00 3992.00
IUUC-Atr-002524 Amborella trichopoda 96.93 0.00e+00 4571.00
IUUC-Apl-004039 Anas platyrhynchos 83.70 0.00e+00 3874.00
IUUC-Aca-005394 Anolis carolinensis 84.06 0.00e+00 3236.00
IUUC-Aly-005909 Arabidopsis lyrata 95.70 0.00e+00 4522.00
IUUC-Ath-007237 Arabidopsis thaliana 96.31 0.00e+00 4547.00
IUUC-Ago-007815 Ashbya gossypii 62.25 0.00e+00 3051.00
IUUC-Acl-008111 Aspergillus clavatus 72.05 0.00e+00 3518.00
IUUC-Afl-008609 Aspergillus flavus 71.75 0.00e+00 2133.00
IUUC-Afu-009078 Aspergillus fumigatus 73.19 0.00e+00 2336.00
IUUC-Ani-009297 Aspergillus nidulans 72.46 0.00e+00 2298.00
IUUC-Ang-009749 Aspergillus niger 72.17 0.00e+00 3545.00
IUUC-Aor-010106 Aspergillus oryzae 72.30 0.00e+00 3533.00
IUUC-Ate-010566 Aspergillus terreus 72.31 0.00e+00 3528.00
IUUC-Ame-011416 Astyanax mexicanus 83.48 0.00e+00 4027.00
IUUC-Bgr-012078 Blumeria graminis 70.06 0.00e+00 2208.00
IUUC-Bta-013532 Bos taurus 82.74 0.00e+00 3992.00
IUUC-Bci-013914 Botrytis cinerea 73.06 0.00e+00 2330.00
IUUC-Bdi-014349 Brachypodium distachyon 95.16 0.00e+00 4487.00
IUUC-Bol-015707 Brassica oleracea 94.92 0.00e+00 4570.00
IUUC-Bra-017086 Brassica rapa 93.71 0.00e+00 4519.00
IUUC-Cel-018508 Caenorhabditis elegans 80.98 0.00e+00 3915.00
IUUC-Cja-019483 Callithrix jacchus 82.74 0.00e+00 3992.00
IUUC-Cfa-021018 Canis familiaris 82.74 0.00e+00 3992.00
IUUC-Cpo-022159 Cavia porcellus 82.74 0.00e+00 3992.00
IUUC-Cre-022998 Chlamydomonas reinhardtii 84.55 0.00e+00 4046.00
IUUC-Csa-023885 Chlorocebus sabaeus 82.74 0.00e+00 3992.00
IUUC-Cho-024639 Choloepus hoffmanni 84.96 0.00e+00 2349.00
IUUC-Cin-025356 Ciona intestinalis 69.15 0.00e+00 638.00
IUUC-Csv-025880 Ciona savignyi 81.41 0.00e+00 3924.00
IUUC-Cgl-026713 Colletotrichum gloeosporioides 70.00 0.00e+00 3413.00
IUUC-Cne-026874 Cryptococcus neoformans 74.10 0.00e+00 2193.00
IUUC-Cme-027252 Cyanidioschyzon merolae 33.33 0.00e+00 999.00
IUUC-Dre-027996 Danio rerio 83.35 0.00e+00 4023.00
IUUC-Dno-029708 Dasypus novemcinctus 83.75 0.00e+00 3731.00
IUUC-Dor-030119 Dipodomys ordii 80.33 0.00e+00 3571.00
IUUC-Dse-031333 Dothistroma septosporum 72.42 0.00e+00 3474.00
IUUC-Dme-031908 Drosophila melanogaster 83.37 0.00e+00 3971.00
IUUC-Ete-032766 Echinops telfairi 83.10 0.00e+00 3305.00
IUUC-Eca-034109 Equus caballus 82.74 0.00e+00 3992.00
IUUC-Eeu-035094 Erinaceus europaeus 85.25 0.00e+00 2061.00
IUUC-Fca-035567 Felis catus 84.57 0.00e+00 3337.00
IUUC-Fal-036613 Ficedula albicollis 82.83 0.00e+00 3998.00
IUUC-Fox-037855 Fusarium oxysporum 71.51 0.00e+00 3488.00
IUUC-Fso-038078 Fusarium solani 71.21 0.00e+00 3478.00
IUUC-Gmo-038986 Gadus morhua 82.24 0.00e+00 3970.00
IUUC-Ggr-039855 Gaeumannomyces graminis 70.10 0.00e+00 3432.00
IUUC-Gga-040719 Gallus gallus 82.83 0.00e+00 3998.00
IUUC-Gac-042502 Gasterosteus aculeatus 82.90 0.00e+00 4016.00
IUUC-Gma-043317 Glycine max 96.66 0.00e+00 4583.00
IUUC-Ggo-045622 Gorilla gorilla 78.32 0.00e+00 3713.00
IUUC-Hsa-046060 Homo sapiens 82.74 0.00e+00 3992.00
IUUC-Hvu-047251 Hordeum vulgare 95.88 0.00e+00 4149.00
IUUC-Itr-048517 Ictidomys tridecemlineatus 80.00 0.00e+00 2004.00
IUUC-Kpa-049289 Komagataella pastoris 64.59 0.00e+00 3117.00
IUUC-Lch-049690 Latimeria chalumnae 81.79 0.00e+00 3700.00
IUUC-Lpe-050868 Leersia perrieri 94.08 0.00e+00 4464.00
IUUC-Loc-052365 Lepisosteus oculatus 82.66 0.00e+00 4008.00
IUUC-Lma-053043 Leptosphaeria maculans 71.95 0.00e+00 3566.00
IUUC-Laf-053582 Loxodonta africana 82.74 0.00e+00 3992.00
IUUC-Mcc-055024 Macaca mulatta 82.74 0.00e+00 3992.00
IUUC-Meu-056637 Macropus eugenii 82.03 0.00e+00 3880.00
IUUC-Mor-057244 Magnaporthe oryzae 71.08 0.00e+00 3424.00
IUUC-Mpo-057580 Magnaporthe poae 70.36 0.00e+00 3437.00
IUUC-Mtr-058326 Medicago truncatula 96.65 0.00e+00 4605.00
IUUC-Mla-059121 Melampsora laricipopulina 73.94 0.00e+00 3495.00
IUUC-Mga-059789 Meleagris gallopavo 82.83 0.00e+00 3998.00
IUUC-Mvi-060563 Microbotryum violaceum 72.27 0.00e+00 3498.00
IUUC-Mmr-060880 Microcebus murinus 81.76 0.00e+00 3933.00
IUUC-Mdo-062237 Monodelphis domestica 82.66 0.00e+00 3992.00
IUUC-Mmu-064177 Mus musculus 82.83 0.00e+00 3994.00
IUUC-Mac-065558 Musa acuminata 93.98 0.00e+00 4327.00
IUUC-Mpu-066903 Mustela putorius furo 82.74 0.00e+00 3992.00
IUUC-Mlu-067424 Myotis lucifugus 82.60 0.00e+00 3982.00
IUUC-Nfi-068265 Neosartorya fischeri 73.14 0.00e+00 2329.00
IUUC-Ncr-068963 Neurospora crassa 71.40 0.00e+00 3496.00
IUUC-Nle-069111 Nomascus leucogenys 85.43 0.00e+00 2863.00
IUUC-Opr-070706 Ochotona princeps 81.42 0.00e+00 3893.00
IUUC-Ont-071405 Oreochromis niloticus 83.53 0.00e+00 4021.00
IUUC-Oan-073481 Ornithorhynchus anatinus 86.36 0.00e+00 1976.00
IUUC-Ocu-074231 Oryctolagus cuniculus 82.74 0.00e+00 3992.00
IUUC-Oba-075452 Oryza barthii 95.39 0.00e+00 4415.00
IUUC-Obr-076377 Oryza brachyantha 95.35 0.00e+00 4413.00
IUUC-Ogl-077666 Oryza glaberrima 95.29 0.00e+00 4477.00
IUUC-Ogu-078187 Oryza glumaepatula 95.43 0.00e+00 4417.00
IUUC-Oin-079234 Oryza indica 95.26 0.00e+00 4412.00
IUUC-Olo-080543 Oryza longistaminata 95.39 0.00e+00 4415.00
IUUC-Ome-081541 Oryza meridionalis 94.69 0.00e+00 4445.00
IUUC-Oni-082712 Oryza nivara 96.15 0.00e+00 3545.00
IUUC-Opu-083904 Oryza punctata 95.08 0.00e+00 4467.00
IUUC-Oru-084749 Oryza rufipogon 95.21 0.00e+00 4477.00
IUUC-Osa-085504 Oryza sativa 95.13 0.00e+00 2237.00
IUUC-Ola-087464 Oryzias latipes 83.26 0.00e+00 3785.00
IUUC-Olu-087705 Ostreococcus lucimarinus 84.69 0.00e+00 4109.00
IUUC-Oga-087910 Otolemur garnettii 93.02 1.00e-70 257.00
IUUC-Oar-089892 Ovis aries 82.64 0.00e+00 3986.00
IUUC-Ptr-090562 Pan troglodytes 89.51 0.00e+00 870.00
IUUC-Pan-092555 Papio anubis 83.80 0.00e+00 3934.00
IUUC-Psi-094049 Pelodiscus sinensis 82.70 0.00e+00 3994.00
IUUC-Pma-094240 Petromyzon marinus 82.25 0.00e+00 3804.00
IUUC-Pno-095146 Phaeosphaeria nodorum 70.45 0.00e+00 3435.00
IUUC-Ppa-095776 Physcomitrella patens 95.02 0.00e+00 4498.00
IUUC-Pfo-097177 Poecilia formosa 83.56 0.00e+00 4016.00
IUUC-Pab-097961 Pongo abelii 82.74 0.00e+00 3992.00
IUUC-Pop-099731 Populus trichocarpa 97.94 0.00e+00 4636.00
IUUC-Pca-100655 Procavia capensis 83.49 0.00e+00 1452.00
IUUC-Ppe-101199 Prunus persica 95.20 0.00e+00 4495.00
IUUC-Pva-103175 Pteropus vampyrus 87.09 0.00e+00 3221.00
IUUC-Pgr-103467 Puccinia graminis 73.89 0.00e+00 3513.00
IUUC-Ptt-103770 Puccinia triticina 67.74 0.00e+00 3147.00
IUUC-Pte-104210 Pyrenophora teres 71.59 0.00e+00 3516.00
IUUC-Pyt-104572 Pyrenophora triticirepentis 72.42 0.00e+00 2300.00
IUUC-Rno-105997 Rattus norvegicus 82.83 0.00e+00 3994.00
IUUC-Sce-106157 Saccharomyces cerevisiae 61.59 0.00e+00 2997.00
IUUC-Sha-107355 Sarcophilus harrisii 82.62 0.00e+00 3989.00
IUUC-Sja-107760 Schizosaccharomyces japonicus 73.54 0.00e+00 3488.00
IUUC-Spo-108160 Schizosaccharomyces pombe 73.02 0.00e+00 3521.00
IUUC-Ssl-108519 Sclerotinia sclerotiorum 73.25 0.00e+00 2329.00
IUUC-Smo-109278 Selaginella moellendorffii 94.08 0.00e+00 4450.00
IUUC-Sit-110777 Setaria italica 94.99 0.00e+00 4496.00
IUUC-Sly-110889 Solanum lycopersicum 97.29 0.00e+00 4598.00
IUUC-Stu-112016 Solanum tuberosum 97.16 0.00e+00 4596.00
IUUC-Sar-113245 Sorex araneus 80.99 0.00e+00 2314.00
IUUC-Sbi-114423 Sorghum bicolor 94.63 0.00e+00 1984.00
IUUC-Sre-115077 Sporisorium reilianum 66.81 0.00e+00 3216.00
IUUC-Ssc-116211 Sus scrofa 83.59 0.00e+00 3845.00
IUUC-Tgu-116697 Taeniopygia guttata 82.83 0.00e+00 3998.00
IUUC-Tru-117984 Takifugu rubripes 83.44 0.00e+00 4026.00
IUUC-Tsy-118893 Tarsius syrichta 83.19 0.00e+00 1335.00
IUUC-Tni-120620 Tetraodon nigroviridis 85.67 0.00e+00 3028.00
IUUC-Tre-122031 Trichoderma reesei 71.41 0.00e+00 3486.00
IUUC-Tvi-122603 Trichoderma virens 71.28 0.00e+00 3476.00
IUUC-Tae-125167 Triticum aestivum 94.94 0.00e+00 4481.00
IUUC-Tur-126772 Triticum urartu 95.30 0.00e+00 4434.00
IUUC-Tme-126899 Tuber melanosporum 72.31 0.00e+00 3557.00
IUUC-Tbe-127364 Tupaia belangeri 88.53 0.00e+00 2668.00
IUUC-Ttr-129009 Tursiops truncatus 82.23 0.00e+00 3960.00
IUUC-Vda-130015 Verticillium dahliae 71.05 0.00e+00 2294.00
IUUC-Vpa-130769 Vicugna pacos 86.66 0.00e+00 1051.00
IUUC-Vvi-131030 Vitis vinifera 98.07 0.00e+00 4595.00
IUUC-Xtr-132067 Xenopus tropicalis 83.54 0.00e+00 3995.00
IUUC-Xma-134252 Xiphophorus maculatus 83.52 0.00e+00 4016.00
IUUC-Yli-134434 Yarrowia lipolytica 65.59 0.00e+00 3124.00
IUUC-Zma-134994 Zea mays 95.25 0.00e+00 4472.00
Created Date 25-Jun-2017

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