iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111270

Ensembl Protein ID

Solyc12g007320.1.1

UniProt Accession

K4DBR9; K4DBR9_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g007320.1	Solyc12g007320.1.1	Solyc12g007320.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-09	39.2	131	173

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlp....CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ f+d + vl+    C+H+fh +C+ +w        k+ +CPlCr
   Q: 131  CAVCLSKFED-VEVLRllpkCKHAFHINCIDQW------LEKHSSCPLCR 173
           ********99.66655555**************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MSNSDRRSNH IAIILVITIL QFLLLNIVKA HDYNTFQELP STQDEANFRP SIAVVIGILS 60
IMFSLTFLLL LYAKFCRRSS LPLHNAMQMD QDRLTTLPMA RVSSGIDKTI IESLPFFRFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGAATT CAGATAGAAG AAGTAACCAT ATCGCGATTA TACTAGTTAT AACAATCCTT 60
CAATTTCTAC TCCTAAATAT TGTTAAAGCC CATGACTACA ACACATTTCA AGAATTGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002959	Amborella trichopoda	47.95	6.00e-69	254.00
IUUC-Ath-007561	Arabidopsis thaliana	42.69	4.00e-76	277.00
IUUC-Bol-015696	Brassica oleracea	46.07	6.00e-72	263.00
IUUC-Bra-017430	Brassica rapa	43.81	5.00e-73	267.00
IUUC-Mac-064701	Musa acuminata	44.96	5.00e-70	257.00
IUUC-Ppe-101585	Prunus persica	46.60	2.00e-86	311.00
IUUC-Smo-108817	Selaginella moellendorffii	35.90	4.00e-22	97.80
IUUC-Stu-112444	Solanum tuberosum	87.96	0.00e+00	672.00
IUUC-Sbi-114371	Sorghum bicolor	34.59	9.00e-40	157.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence