iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048596

Ensembl Protein ID

ENSSTOP00000001493.2

UniProt Accession

I3LZ06; I3LZ06_ICTTR

Genbank Protein ID

ENSSTOP00000001493

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01102959

Gene Name

ARPC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000001668.2	ENSSTOT00000001666.2	ENSSTOP00000001493.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.60e-17	60.6	51	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H++ vt++++ ++ +++v+++ D + +vW l
   Q: 51   HNGQVTGIDWaPEsNRIVTCGTDRNAYVWTL 81
           9**********888***************75 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MAYHSFLVEP ISCHAWNKDR TQIAICPNNH EVHIYEKSGA KWTKVHELKE HNGQVTGIDW 60
APESNRIVTC GTDRNAYVWT LKGHTWKPTL VILRINRAAR CVRWAPNENK FAVGSGSRVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGAGCCATGG CTTACCACAG CTTCCTGGTG GAGCCCATCA GCTGCCATGC CTGGAATAAG 60
GATCGCACCC GTGAGTGCCC ACCGGGAGTG CCCCCCAACC AGTGGGCTCC TTGAGACCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030141--ARC1B
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0070062--C:extracellular exosome
GO:0005925--C:focal adhesion
GO:0005200--F:structural constituent of cytoskeleton
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	45.20	1.00e-64	239.00
IUUC-Aml-001709	Ailuropoda melanoleuca	95.74	0.00e+00	727.00
IUUC-Aly-006568	Arabidopsis lyrata	41.19	1.00e-79	290.00
IUUC-Ath-006683	Arabidopsis thaliana	42.01	3.00e-80	291.00
IUUC-Ame-011512	Astyanax mexicanus	80.59	0.00e+00	652.00
IUUC-Bta-012442	Bos taurus	95.42	0.00e+00	718.00
IUUC-Bol-016274	Brassica oleracea	41.94	1.00e-82	299.00
IUUC-Bra-016790	Brassica rapa	41.24	6.00e-81	293.00
IUUC-Cja-019899	Callithrix jacchus	96.25	0.00e+00	736.00
IUUC-Cfa-020067	Canis familiaris	95.70	0.00e+00	726.00
IUUC-Cpo-022461	Cavia porcellus	98.39	0.00e+00	738.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	35.20	2.00e-35	141.00
IUUC-Csa-023277	Chlorocebus sabaeus	88.98	0.00e+00	685.00
IUUC-Dre-028141	Danio rerio	80.59	0.00e+00	644.00
IUUC-Dor-030559	Dipodomys ordii	96.77	0.00e+00	734.00
IUUC-Ete-032299	Echinops telfairi	94.89	0.00e+00	725.00
IUUC-Eca-033593	Equus caballus	96.25	0.00e+00	728.00
IUUC-Fca-036254	Felis catus	97.58	0.00e+00	734.00
IUUC-Fal-037453	Ficedula albicollis	88.24	0.00e+00	691.00
IUUC-Gmo-038471	Gadus morhua	70.32	1.00e-163	568.00
IUUC-Gga-040898	Gallus gallus	88.44	0.00e+00	695.00
IUUC-Gac-042236	Gasterosteus aculeatus	74.80	3.00e-177	613.00
IUUC-Gma-043227	Glycine max	40.75	9.00e-80	290.00
IUUC-Ggo-045355	Gorilla gorilla	81.50	1.00e-168	585.00
IUUC-Hsa-046623	Homo sapiens	97.85	0.00e+00	735.00
IUUC-Lch-049679	Latimeria chalumnae	78.98	0.00e+00	638.00
IUUC-Lpe-050869	Leersia perrieri	41.78	4.00e-79	288.00
IUUC-Loc-052140	Lepisosteus oculatus	80.59	0.00e+00	631.00
IUUC-Laf-054287	Loxodonta africana	93.88	0.00e+00	699.00
IUUC-Meu-056302	Macropus eugenii	90.59	0.00e+00	711.00
IUUC-Mtr-057659	Medicago truncatula	41.02	7.00e-83	300.00
IUUC-Mga-059279	Meleagris gallopavo	88.44	0.00e+00	696.00
IUUC-Mmr-060752	Microcebus murinus	97.51	0.00e+00	726.00
IUUC-Mdo-062836	Monodelphis domestica	86.56	0.00e+00	668.00
IUUC-Mmu-064099	Mus musculus	96.01	0.00e+00	724.00
IUUC-Mpu-066247	Mustela putorius furo	96.77	0.00e+00	720.00
IUUC-Mlu-067571	Myotis lucifugus	96.51	0.00e+00	738.00
IUUC-Nle-069492	Nomascus leucogenys	83.60	3.00e-171	593.00
IUUC-Ont-071316	Oreochromis niloticus	76.38	1.00e-176	612.00
IUUC-Oan-072692	Ornithorhynchus anatinus	88.98	0.00e+00	700.00
IUUC-Ocu-074187	Oryctolagus cuniculus	92.74	0.00e+00	707.00
IUUC-Oba-075379	Oryza barthii	42.19	5.00e-80	291.00
IUUC-Obr-076404	Oryza brachyantha	42.31	2.00e-80	292.00
IUUC-Ogl-077409	Oryza glaberrima	39.78	6.00e-74	270.00
IUUC-Ogu-078759	Oryza glumaepatula	42.19	6.00e-80	290.00
IUUC-Oin-079118	Oryza indica	42.23	8.00e-81	293.00
IUUC-Olo-081055	Oryza longistaminata	41.64	1.00e-70	259.00
IUUC-Ome-081281	Oryza meridionalis	42.19	7.00e-80	290.00
IUUC-Oni-083043	Oryza nivara	42.19	5.00e-80	291.00
IUUC-Oru-084839	Oryza rufipogon	42.19	5.00e-80	291.00
IUUC-Osa-085377	Oryza sativa	42.23	1.00e-80	293.00
IUUC-Oga-088610	Otolemur garnettii	98.12	0.00e+00	737.00
IUUC-Oar-089639	Ovis aries	94.07	0.00e+00	701.00
IUUC-Ptr-091023	Pan troglodytes	98.12	0.00e+00	738.00
IUUC-Pan-091727	Papio anubis	97.58	0.00e+00	741.00
IUUC-Pfo-097058	Poecilia formosa	74.54	2.00e-176	611.00
IUUC-Pab-098238	Pongo abelii	97.58	0.00e+00	738.00
IUUC-Pca-100580	Procavia capensis	94.35	0.00e+00	713.00
IUUC-Ppe-101681	Prunus persica	42.51	3.00e-82	298.00
IUUC-Pva-102928	Pteropus vampyrus	94.09	0.00e+00	695.00
IUUC-Rno-104846	Rattus norvegicus	96.51	0.00e+00	728.00
IUUC-Sit-110150	Setaria italica	41.03	2.00e-79	289.00
IUUC-Sly-111048	Solanum lycopersicum	42.59	6.00e-78	283.00
IUUC-Sar-113404	Sorex araneus	78.29	6.00e-157	546.00
IUUC-Sbi-114685	Sorghum bicolor	42.08	8.00e-79	286.00
IUUC-Tru-118106	Takifugu rubripes	74.47	3.00e-178	617.00
IUUC-Tni-120079	Tetraodon nigroviridis	75.79	6.00e-180	622.00
IUUC-Tca-121645	Theobroma cacao	43.36	3.00e-80	291.00
IUUC-Tae-125810	Triticum aestivum	37.56	2.00e-71	262.00
IUUC-Tur-126640	Triticum urartu	39.78	2.00e-69	255.00
IUUC-Ttr-128698	Tursiops truncatus	96.51	0.00e+00	733.00
IUUC-Vvi-131647	Vitis vinifera	42.16	1.00e-81	296.00
IUUC-Xtr-131893	Xenopus tropicalis	83.60	0.00e+00	661.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence