iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111236

Ensembl Protein ID

Solyc07g054080.1.1

UniProt Accession

K4CFV3; K4CFV3_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc07g054080.1	Solyc07g054080.1.1	Solyc07g054080.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-07	32.6	35	97
E3 activity/RING/RING	1.00e-08	36.3	37	86

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwl........asggk.....tcPvtrqplteedlvPn 58
           f C I l+l +dPvv+ +G+ y   +I kw+        +         +cPv++++++e++l+P 
   Q: 35   FECNICLDLVHDPVVTLCGHLYCWPCIYKWIhfqsvpseN---LdqqqpQCPVCKAEVSERTLIPL 97
           99*****************************886655541...055567***************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw.....pglknssskefrCPlCr 46
           C iCl+   d p+v+ CgH+++  C++kw     + + n+ +++ +CP+C+
   Q: 37   CNICLDLVHD-PVVTLCGHLYCWPCIYKWihfqsVPSENLDQQQPQCPVCK 86
           99********.9999***********************************7 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MALEQLDTTF NKHDTPLGKW KTMNDEVEEN ISGGFECNIC LDLVHDPVVT LCGHLYCWPC 60
IYKWIHFQSV PSENLDQQQP QCPVCKAEVS ERTLIPLYGR GGQSTKPSEG KAPNLGIVIP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTTAG AACAGCTGGA CACTACCTTT AACAAACACG ATACTCCATT AGGGAAATGG 60
AAGACAATGA ACGATGAAGT TGAAGAGAAT ATTTCTGGTG GTTTTGAATG TAACATATGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sly:101264841

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006069	Arabidopsis lyrata	44.22	4.00e-39	153.00
IUUC-Ath-006807	Arabidopsis thaliana	43.72	6.00e-40	156.00
IUUC-Bol-015157	Brassica oleracea	42.13	1.00e-38	152.00
IUUC-Gma-043657	Glycine max	46.12	1.00e-54	205.00
IUUC-Kpa-049242	Komagataella pastoris	38.46	3.00e-08	50.80
IUUC-Mtr-058147	Medicago truncatula	46.84	2.00e-53	201.00
IUUC-Pop-099799	Populus trichocarpa	53.41	2.00e-65	241.00
IUUC-Ppe-101414	Prunus persica	50.79	1.00e-58	218.00
IUUC-Stu-112674	Solanum tuberosum	86.78	9.00e-111	391.00
IUUC-Tca-121702	Theobroma cacao	50.20	1.00e-61	228.00
IUUC-Tur-126644	Triticum urartu	56.38	1.00e-26	113.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence