iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005900

Ensembl Protein ID

fgenesh1_pm.C_scaffold_1002616

UniProt Accession

D7KIC1; D7KIC1_ARALL

Genbank Protein ID

EFH69997.1

Protein Name

F6N18.13

Genbank Nucleotide ID

GL348713

Gene Name

ARALYDRAFT_313836

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_1002616	fgenesh1_pm.C_scaffold_1002616	fgenesh1_pm.C_scaffold_1002616

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	5.00e-08	33.4	681	754

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgseltlkvnpsdtVaeLKekiekklgip.peqqrLiykGkiLeddktLadyglkdgstihllekk 73
           ++++vksl g+  +l+v   ++V+ LK k ++kl +   e +++ y Gk+Led k+La+ +++++s +hl+++k
   Q: 681  MKIIVKSLGGKGSKLHVGIEESVSSLKAKASRKLDFKeTEAVKMFYMGKELEDEKSLAAQNVQPNSLVHLIRTK 754
           789********88************************999*******************************987 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAESNGKGSH NETSSGAVLS DPGHVLGDND DEEYEDNSRG FNLGFIFGNV DNSGDLDADY 60
LDEVICLTLS DAKEHLSALA DKLGSSLPDI NLLAKSERTA SDPAEQVFIF HLTSNYDRKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGAAT CCAACGGCAA GGGTTCCCAC AATGAGACTT CCTCAGGTAA GTATATGTTG 60
CTTTCTTATC AAATTTTGTT GCTTTATGAC TGTTCTACAA TTTATGACTG TTTCTGAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0103--Bromodomain
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001487--Bromodomain
IPR018359--Bromodomain_CS
IPR009067--TAF_II_230-bd
IPR022591--TFIID_sub1_DUF3591
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS00633--BROMODOMAIN_1
PS50014--BROMODOMAIN_2
PS50053--UBIQUITIN_2

Pfam

PF00439--Bromodomain
PF12157--DUF3591
PF00240--ubiquitin

PRINTS

PR00503--BROMODOMAIN

SMART

SM00297--BROMO
SM00213--UBQ

KEGG

aly:ARALYDRAFT_313836

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003084	Amborella trichopoda	53.88	0.00e+00	1087.00
IUUC-Ath-006976	Arabidopsis thaliana	92.27	0.00e+00	3246.00
IUUC-Bol-015982	Brassica oleracea	82.50	0.00e+00	2805.00
IUUC-Bra-017875	Brassica rapa	82.77	0.00e+00	2779.00
IUUC-Dor-030279	Dipodomys ordii	36.49	4.00e-08	54.70
IUUC-Eeu-035154	Erinaceus europaeus	36.49	4.00e-08	54.30
IUUC-Gma-044209	Glycine max	50.12	0.00e+00	1368.00
IUUC-Hvu-047343	Hordeum vulgare	44.67	9.00e-176	609.00
IUUC-Lpe-051566	Leersia perrieri	45.45	0.00e+00	1036.00
IUUC-Mpo-057370	Magnaporthe poae	33.33	9.00e-10	58.90
IUUC-Mac-064798	Musa acuminata	48.88	0.00e+00	1221.00
IUUC-Oba-075663	Oryza barthii	49.10	0.00e+00	940.00
IUUC-Obr-076214	Oryza brachyantha	46.81	0.00e+00	981.00
IUUC-Ogl-077575	Oryza glaberrima	48.78	0.00e+00	937.00
IUUC-Ogu-079017	Oryza glumaepatula	48.09	0.00e+00	1016.00
IUUC-Oin-079864	Oryza indica	48.84	0.00e+00	1026.00
IUUC-Olo-080777	Oryza longistaminata	47.90	0.00e+00	1021.00
IUUC-Ome-081474	Oryza meridionalis	48.84	0.00e+00	1027.00
IUUC-Oni-082068	Oryza nivara	49.06	0.00e+00	1032.00
IUUC-Opu-083274	Oryza punctata	46.48	0.00e+00	1067.00
IUUC-Oru-085067	Oryza rufipogon	48.76	0.00e+00	1022.00
IUUC-Ppa-095489	Physcomitrella patens	54.73	0.00e+00	787.00
IUUC-Pop-098790	Populus trichocarpa	54.92	0.00e+00	1407.00
IUUC-Ppe-101917	Prunus persica	52.18	0.00e+00	1293.00
IUUC-Smo-109033	Selaginella moellendorffii	46.21	0.00e+00	753.00
IUUC-Sit-110106	Setaria italica	45.00	0.00e+00	946.00
IUUC-Sly-111896	Solanum lycopersicum	50.15	0.00e+00	1500.00
IUUC-Tsy-119388	Tarsius syrichta	36.49	3.00e-08	55.10
IUUC-Tca-121471	Theobroma cacao	55.62	0.00e+00	1501.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence