iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017745

Ensembl Protein ID

Bra006219.1-P

UniProt Accession

M4CPT0; M4CPT0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra006219	Bra006219.1	Bra006219.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/APC_C/CDC20	2.60e-141	471.3	167	467
E3 adaptor/Cullin RING/DCX/DWD	4.50e-25	87.7	301	338

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladleekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltghs 96
           p+kvldap+l+ddfyln++dWss+nvlav+Lg++vylwsa++++v+kl+dl ++d+v+s++w++eg++++vGt++g+v+++D +++k+vrt+ gh+
   Q: 167  PHKVLDAPSLQDDFYLNVVDWSSQNVLAVGLGTCVYLWSASNSKVTKLCDLGPNDSVCSLQWTREGSYISVGTSHGQVQVWDGTQCKRVRTMGGHQ 262
           689********************************************************************************************* PP
   S: 97   arvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdasssePlkkfkehkaavkaiawsPwqk 192
           +r g L+Wn+ +lssGsrd++il++d+rv+   +s+l +h++evCGlkw++d+++LasGGnDn++ vw+++s++P++k +eh+aavkai+wsP+q+
   Q: 263  TRTGVLAWNSRILSSGSRDRNILQHDIRVQSDYVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPIHKLTEHTAAVKAITWSPHQS 358
           ************************************************************************************************ PP
   S: 193  slLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagD 288
           slLasGGGtaDrci+fwnt++g++l++idtgsqvc+l+wsk+ +e+vsthG+++n+i+lwkyps++kva+l+gh++Rvl+la spdg++ivt+agD
   Q: 359  SLLASGGGTADRCIRFWNTTNGHQLNSIDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMAKVATLTGHSMRVLYLATSPDGQTIVTGAGD 454
           ************************************************************************************************ PP
   S: 289  etlrfwklfdkkk 301
           etlrfw++f + k
   Q: 455  ETLRFWNVFPSVK 467
           *********7655 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+++v++l++ +d + l+sG++D+++ vW+ +++ ++
   Q: 301  GHKSEVCGLKWsHDdRELASGGNDNQLLVWNNHSQQPI 338
           8***********55599**************9887765 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MESPQKTKTG LNLPAGMNQT SLRLETFSSS FRGISTLSSP SKSTCSDRFI PCRSSSRLHA 60
FDLQDKEPTT PVKEGGNEAY SRLLKSELFG SDFVSNSLSP AGGGGGQGGS ASSPMSPCTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAATCCC CACAGAAAAC CAAAACCGGT TTAAACCTCC CCGCGGGGAT GAACCAGACC 60
TCTTTACGTC TCGAGACGTT CTCGAGCTCG TTCCGCGGGA TCTCGACCTT ATCCTCCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003035	Amborella trichopoda	70.62	0.00e+00	638.00
IUUC-Aly-006009	Arabidopsis lyrata	94.44	0.00e+00	811.00
IUUC-Ath-007167	Arabidopsis thaliana	94.44	0.00e+00	798.00
IUUC-Bdi-015033	Brachypodium distachyon	63.89	2.00e-175	608.00
IUUC-Bol-016159	Brassica oleracea	97.94	0.00e+00	839.00
IUUC-Gma-043563	Glycine max	74.95	0.00e+00	696.00
IUUC-Hvu-047486	Hordeum vulgare	81.36	2.00e-149	520.00
IUUC-Lpe-051568	Leersia perrieri	68.36	2.00e-157	548.00
IUUC-Mtr-057760	Medicago truncatula	75.60	0.00e+00	692.00
IUUC-Mac-064942	Musa acuminata	71.00	0.00e+00	637.00
IUUC-Oba-075417	Oryza barthii	80.06	2.00e-154	538.00
IUUC-Obr-076033	Oryza brachyantha	71.33	7.00e-176	609.00
IUUC-Ogl-077441	Oryza glaberrima	64.77	2.00e-178	618.00
IUUC-Ogu-078877	Oryza glumaepatula	62.53	4.00e-169	587.00
IUUC-Oin-079461	Oryza indica	66.08	2.00e-167	581.00
IUUC-Olo-080716	Oryza longistaminata	66.13	1.00e-161	563.00
IUUC-Ome-081663	Oryza meridionalis	63.83	8.00e-171	593.00
IUUC-Oni-083097	Oryza nivara	62.73	1.00e-169	588.00
IUUC-Opu-083464	Oryza punctata	62.53	1.00e-168	585.00
IUUC-Oru-084848	Oryza rufipogon	62.73	1.00e-169	588.00
IUUC-Osa-085451	Oryza sativa	64.77	2.00e-178	618.00
IUUC-Pop-099269	Populus trichocarpa	76.91	0.00e+00	691.00
IUUC-Ppe-101285	Prunus persica	81.93	0.00e+00	731.00
IUUC-Sit-110550	Setaria italica	67.42	2.00e-177	615.00
IUUC-Sly-111395	Solanum lycopersicum	74.36	0.00e+00	675.00
IUUC-Stu-112356	Solanum tuberosum	74.56	0.00e+00	680.00
IUUC-Sbi-114386	Sorghum bicolor	67.55	6.00e-177	613.00
IUUC-Tsy-118931	Tarsius syrichta	39.25	1.00e-57	216.00
IUUC-Tca-121682	Theobroma cacao	79.40	0.00e+00	709.00
IUUC-Tae-123028	Triticum aestivum	67.49	0.00e+00	625.00
IUUC-Tur-126545	Triticum urartu	74.52	2.00e-136	478.00
IUUC-Vpa-130775	Vicugna pacos	39.04	1.00e-55	210.00
IUUC-Vvi-131748	Vitis vinifera	79.26	0.00e+00	730.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence