iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g009770	Sb03g009770.1	Sb03g009770.1
Sb03g009770	Sb03g009770.2	Sb03g009770.2
Sb03g009770	Sb03g009770.3	Sb03g009770.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-26	92.0	444	477
UBD/Beta-Prp	2.60e-42	145.9	401	652

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlr 31
           H+++v+++af  ++  l +v+++dD+ ikvWD++
   Q: 444  HSGGVNDIAFsrPNkQLcVVTCGDDKLIKVWDMH 477
           9**********9774334799***********75 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
             i+ v++spd++l+ ++++ + i ++ +++++    + +++ h+++v+++ fs+  k    vt+++D++ikvwd+   k + t++ghe+ v+s+ 
   Q: 401  ISINRVTWSPDGELIGVAFTKHLIHLHAYQPPNEtrhVLEIEAHSGGVNDIAFSRPNKqlCVVTCGDDKLIKVWDMHGQK-LFTFEGHEAPVYSIC 495
           5688899************************9998888899*************98888899**************8766.569**********98 PP
   S: 102  fsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkllrtl...tgghtdsvyslsf 188
            +   s +++ s+s d  i+ w  ++     + ++   ++ +++ ++ dg  l+s+++    D+ +  W+ + g++ rt    ++   +    ++f
   Q: 496  PHHkeSIQFIFSTSLDGKIKAWLYDNVGSRVDYEA-PGKWCTTMLYSADGTRLFSCGTskegDSYLVEWNESEGSIKRTYsgfRKRSAGVAGVVQF 590
           8876555***************8877666654444.45699999999999999999874444667777888999999999666555566666777* PP
   S: 189  dsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiri 248
           d  +++++++++d+++k+wd+ ++++      +g   +  ++rf +++++l++++ D+  +i
   Q: 591  DTAQNHILAAGEDNQIKFWDVDNNNMliCTDAEGGLPTLPRLRFNKEGNLLAVTTVDNGFKI 652
           **********************8886323444444466667888888888888888877666 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEEKVHAGEW DEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDRHDR AKAVDILVKD LKVFSTFNEE LYKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCGC TCAGCCGCGA GCTCGTCTTC CTCATCCTCC AGTTCCTCGA CGAGGAGAAG 60
TTCAAGGAGA CCGTGCACAA GTGCGTACTC TCCCCTCTCT CTGTCTTTGC GTTGGTTACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000072	Aegilops tauschii	80.93	0.00e+00	1759.00
IUUC-Aly-005503	Arabidopsis lyrata	70.86	0.00e+00	1601.00
IUUC-Ath-006901	Arabidopsis thaliana	71.03	0.00e+00	1609.00
IUUC-Bdi-014677	Brachypodium distachyon	87.73	0.00e+00	1975.00
IUUC-Bol-016487	Brassica oleracea	69.89	0.00e+00	1549.00
IUUC-Bra-016798	Brassica rapa	69.38	0.00e+00	1544.00
IUUC-Gma-042940	Glycine max	72.79	0.00e+00	1690.00
IUUC-Hvu-047370	Hordeum vulgare	87.20	0.00e+00	2016.00
IUUC-Lpe-050951	Leersia perrieri	87.29	0.00e+00	1909.00
IUUC-Mtr-058168	Medicago truncatula	73.03	0.00e+00	1692.00
IUUC-Mac-064999	Musa acuminata	74.85	0.00e+00	1770.00
IUUC-Oba-075415	Oryza barthii	89.05	0.00e+00	2038.00
IUUC-Obr-076726	Oryza brachyantha	88.00	0.00e+00	2033.00
IUUC-Ogl-077810	Oryza glaberrima	89.05	0.00e+00	2038.00
IUUC-Ogu-078090	Oryza glumaepatula	89.05	0.00e+00	2038.00
IUUC-Oin-080158	Oryza indica	87.99	0.00e+00	2030.00
IUUC-Olo-080271	Oryza longistaminata	87.10	0.00e+00	1981.00
IUUC-Ome-081965	Oryza meridionalis	89.75	0.00e+00	2027.00
IUUC-Oni-082421	Oryza nivara	88.87	0.00e+00	2034.00
IUUC-Opu-083912	Oryza punctata	88.96	0.00e+00	2032.00
IUUC-Oru-085201	Oryza rufipogon	89.05	0.00e+00	2038.00
IUUC-Osa-086161	Oryza sativa	89.05	0.00e+00	2038.00
IUUC-Pop-099188	Populus trichocarpa	72.20	0.00e+00	1644.00
IUUC-Ppe-102061	Prunus persica	71.52	0.00e+00	1659.00
IUUC-Sit-110487	Setaria italica	95.85	0.00e+00	2139.00
IUUC-Sly-111169	Solanum lycopersicum	71.45	0.00e+00	1670.00
IUUC-Stu-112369	Solanum tuberosum	71.28	0.00e+00	1669.00
IUUC-Tca-121579	Theobroma cacao	71.16	0.00e+00	1576.00
IUUC-Tae-125707	Triticum aestivum	86.30	0.00e+00	1984.00
IUUC-Tur-126477	Triticum urartu	81.67	0.00e+00	1953.00
IUUC-Vvi-131297	Vitis vinifera	74.02	0.00e+00	1677.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence