iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099610

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

EF146589

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s09100	POPTR_0014s09100.1	POPTR_0014s09100.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-25	89.7	921	951

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDl 30
           gH   v+ ++f ++ +lvs+s D+t+k+WDl
   Q: 921  GHGKTVSYVKFlDSETLVSASTDNTLKLWDL 951
           79999******744999*************8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDQVAEELVA NDVHGNADLQ AKGYDPLTLE PRNALGSPIM CASTRSDWAE SSTTDYMDTS 60
RMEEKDLSRS AITLAEAEPP CSIPCSVKDS GHVVEKLTVG NYWTSHQALG RSLDSNRQHR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTAATGAG AATTTAATTA TGGCTTTTCT ATTTCTGGAA ATTGTTATTT AGAATCTCAC 60
TATGACGTAG AAAAAACGGT GAAATTCCCT CATATTCTTG TATTGGAAGA TATTTACGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005520	Arabidopsis lyrata	48.85	0.00e+00	867.00
IUUC-Ath-007297	Arabidopsis thaliana	50.36	0.00e+00	838.00
IUUC-Bol-015589	Brassica oleracea	48.28	0.00e+00	763.00
IUUC-Bra-016642	Brassica rapa	51.01	0.00e+00	793.00
IUUC-Gma-043294	Glycine max	49.02	0.00e+00	870.00
IUUC-Ppe-101782	Prunus persica	52.43	0.00e+00	989.00
IUUC-Stu-112382	Solanum tuberosum	46.25	0.00e+00	835.00
IUUC-Tca-121762	Theobroma cacao	52.18	0.00e+00	982.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence