iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114500

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G268200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g026330	Sb01g026330.1	Sb01g026330.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.30e-08	34.1	125	166

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg.pl.vlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle+++++ p+ v+ C H+fh+ C+  w        ++++CP+C+
   Q: 125  CPICLEEYDEEnPRsVTKCEHHFHLCCILEW------MERKDTCPVCD 166
           ********5544773588*************......**********5 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGGCCCCSSR TSEAVRAPVD IYRQQNLEEH EPLSSAFDGS SPASAIVAVD TNLDTSTPDT 60
YRAPPAPLPY DVVLAVPDNP GLEKPDTKSK TDDHQESIND EQSLKVDESC KKGVTEDKAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGTTCCGCA GAATCCGAGT CCACTAGCTC TCCTCCCCAG GGCTTTCAAC TTCCCCCAAA 60
CCCCATCGCC TCGCCGCCGA GGCCGAGCGA GCAGAGCACC ACGTCGGGCG GCGTTTCCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR024766--Znf_RING_H2

PROSITE

PS50089--ZF_RING_2

Pfam

PF12678--zf-rbx1

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_01g026330

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000389	Aegilops tauschii	73.49	3.00e-64	236.00
IUUC-Atr-002805	Amborella trichopoda	43.35	8.00e-30	122.00
IUUC-Aly-005682	Arabidopsis lyrata	40.19	2.00e-22	97.80
IUUC-Ath-006898	Arabidopsis thaliana	35.32	3.00e-25	107.00
IUUC-Bdi-014710	Brachypodium distachyon	80.77	6.00e-79	285.00
IUUC-Bol-015746	Brassica oleracea	38.50	4.00e-22	96.70
IUUC-Bra-017455	Brassica rapa	38.68	6.00e-28	116.00
IUUC-Dre-028660	Danio rerio	38.89	2.00e-09	56.60
IUUC-Gma-042911	Glycine max	44.50	2.00e-38	150.00
IUUC-Hvu-047682	Hordeum vulgare	79.77	1.00e-73	268.00
IUUC-Loc-052908	Lepisosteus oculatus	40.74	8.00e-10	58.20
IUUC-Mtr-058420	Medicago truncatula	45.55	4.00e-37	146.00
IUUC-Mac-065486	Musa acuminata	52.02	5.00e-47	179.00
IUUC-Oba-075793	Oryza barthii	81.13	1.00e-68	251.00
IUUC-Obr-076796	Oryza brachyantha	81.46	8.00e-80	288.00
IUUC-Ogl-077552	Oryza glaberrima	81.33	1.00e-72	264.00
IUUC-Ogu-078163	Oryza glumaepatula	81.13	1.00e-68	251.00
IUUC-Oin-079978	Oryza indica	81.33	1.00e-72	264.00
IUUC-Olo-081002	Oryza longistaminata	67.15	4.00e-47	179.00
IUUC-Ome-081206	Oryza meridionalis	81.33	2.00e-72	263.00
IUUC-Oni-082498	Oryza nivara	81.13	1.00e-68	251.00
IUUC-Oru-084462	Oryza rufipogon	81.13	1.00e-68	251.00
IUUC-Osa-085799	Oryza sativa	81.33	1.00e-72	264.00
IUUC-Pop-099699	Populus trichocarpa	48.09	1.00e-38	151.00
IUUC-Ppe-101765	Prunus persica	43.13	5.00e-29	119.00
IUUC-Sit-110172	Setaria italica	90.34	6.00e-85	305.00
IUUC-Sly-111641	Solanum lycopersicum	41.62	1.00e-33	135.00
IUUC-Stu-112073	Solanum tuberosum	41.82	1.00e-31	129.00
IUUC-Tca-121372	Theobroma cacao	44.23	4.00e-28	116.00
IUUC-Tae-124908	Triticum aestivum	81.46	1.00e-78	284.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence