iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131294

Ensembl Protein ID

VIT_16s0013g00280.t01

UniProt Accession

F6I2K3; F6I2K3_VITVI

Genbank Protein ID

CCB61170.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596738

Gene Name

VIT_16s0013g00280

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_16s0013g00280	VIT_16s0013g00280.t01	VIT_16s0013g00280.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-20	72.6	306	346

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGs..dDgtikvWDlrtgvll 36
           gH++ v +la+   +++ l+sG+   Dg ik+W++ +g+++
   Q: 306  GHQAAVKALAWcpyQSDVLASGGgtLDGCIKIWNIQKGTCI 346
           8***********8744899**7777**********999996 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSRFNGDWYS PTRLHDSPTQ YHFPGDRFIP NRSLMDLDQA HTLLTSRTRE VCNSTFGQDE 60
YRRKLEENLF FDSEGRPFRM LVFRGSPKSS KKSIRFLDEM QQQDEAEALH NKNIKQFQYR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCAGAT TCAACGGCGA TTGGTACTCG CCTACTCGCC TCCACGACAG CCCCACCCAG 60
TACCATTTTC CGGTGCATTT TCTTCTTCAA AATCATTTTC TTTTCTTGGA AAATTCTGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033010--Cdc20/Fizzy
IPR013979--TIF_beta_prop-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08662--eIF2A
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043406	Glycine max	65.26	5.00e-176	609.00
IUUC-Mtr-057975	Medicago truncatula	62.28	6.00e-164	569.00
IUUC-Mac-064491	Musa acuminata	55.69	3.00e-128	450.00
IUUC-Pop-099291	Populus trichocarpa	64.83	6.00e-164	569.00
IUUC-Ppe-101170	Prunus persica	64.64	1.00e-159	555.00
IUUC-Sly-111334	Solanum lycopersicum	63.54	1.00e-173	602.00
IUUC-Stu-112271	Solanum tuberosum	61.39	4.00e-171	593.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence