iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014616

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100836961; BRADI_3g01440

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G01440	BRADI3G01440.1	BRADI3G01440.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-23	82.0	255	285

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDl 30
           gH+  vt +++ ++++lv+++ Dgt ++WD+
   Q: 255  GHARAVTYVRWaPGDRLVTSAADGTHRLWDW 285
           89**********999***************7 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MTSRPSSSSH SPSSSSSSAS AYQETSRRDE ADGGGIAAAN PAEDNEADEL SPRGCEWEFR 60
LAATVPSPAM VGASDAIGSV DFDPSGSLLA TAGIARKVRI YNAATLLLDQ QSSSPAACIC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCAGCC GCCCCTCTTC TTCTTCTCAT TCTCCTTCTT CTTCTTCTTC TTCCGCCTCC 60
GCTTACCAAG AAACCTCGCG CCGGGACGAA GCTGACGGCG GCGGCATTGC TGCTGCTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

bdi:100836961

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002851	Amborella trichopoda	38.41	1.00e-63	236.00
IUUC-Aly-005431	Arabidopsis lyrata	47.66	4.00e-76	277.00
IUUC-Ath-006939	Arabidopsis thaliana	47.08	1.00e-71	262.00
IUUC-Bol-015816	Brassica oleracea	42.55	7.00e-72	263.00
IUUC-Bra-016672	Brassica rapa	45.13	5.00e-76	276.00
IUUC-Lpe-051001	Leersia perrieri	69.57	5.00e-55	207.00
IUUC-Ogl-077687	Oryza glaberrima	62.99	6.00e-102	363.00
IUUC-Ogu-078613	Oryza glumaepatula	61.29	1.00e-44	172.00
IUUC-Oin-079632	Oryza indica	62.73	4.00e-101	360.00
IUUC-Ome-081923	Oryza meridionalis	62.73	5.00e-97	347.00
IUUC-Oni-082448	Oryza nivara	61.42	4.00e-102	364.00
IUUC-Opu-083787	Oryza punctata	66.76	2.00e-120	425.00
IUUC-Oru-085278	Oryza rufipogon	62.73	5.00e-97	347.00
IUUC-Pop-099510	Populus trichocarpa	46.45	1.00e-78	285.00
IUUC-Ppe-102088	Prunus persica	45.04	8.00e-76	276.00
IUUC-Smo-109270	Selaginella moellendorffii	37.46	5.00e-48	184.00
IUUC-Sly-111536	Solanum lycopersicum	43.06	9.00e-73	266.00
IUUC-Stu-112915	Solanum tuberosum	42.78	5.00e-74	270.00
IUUC-Tca-120952	Theobroma cacao	44.99	3.00e-82	298.00
IUUC-Tae-123036	Triticum aestivum	68.85	6.00e-122	429.00
IUUC-Vvi-131711	Vitis vinifera	48.60	7.00e-78	284.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence