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Tag Content
iUUCD ID IUUC-Vvi-131013
Ensembl Protein ID VIT_17s0000g07690.t01
UniProt Accession F6GSV3; F6GSV3_VITVI
Genbank Protein ID CCB43010.1
Protein Name Putative uncharacterized protein
Genbank Nucleotide ID FN594950
Gene Name VIT_17s0000g07690
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_17s0000g07690 VIT_17s0000g07690.t01 VIT_17s0000g07690.t01
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 9.00e-36 120.9 230 258
UBD/Beta-Prp 1.70e-45 156.0 185 401
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWD 29
    H d +++la+ +d+++ +Gs D+tikvW+
   Q: 230 HDDAINALALsHDGYIYTGSADKTIKVWR 258
    99********877***************9 PP
   


   UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvw....dlstgkcvht 89
    hh + +++++ s+d+sll + s+d+++k+w++t+ k+l+s+ h+++++a+ +s+dg ++ tgs D+tikvw + ++ ++v t
   Q: 185 VHHVDTVSVLALSEDNSLLYSVSWDRSLKIWRTTDFKCLESVgNAHDDAINALALSHDG-YIYTGSADKTIKVWrkapEDKKHSQVAT 271
    578888999999**********************************************9.**************98655559999*** PP
   S: 90 lkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkl 171
    l++h++ + +l++s +g++l sG +dr i vw+ + + + l+gh++++ c++v + ++++sGs+D+t+r+W+ k+ ++
   Q: 272 LEKHNSGINALALSTDGSVLYSGASDRSIVVWEKD--YSGNMvvvgALRGHSKSILCLAVVS--DVVFSGSADNTIRIWRGihKSYSC 355
    ********************************544..333333366****************..9***************999***** PP
   S: 172 lrtltgghtdsvysls.........fdsngkelvsgsldgtvklwdl 209
    l l+g ht++v++l+ +s++ + sgsld ++k+w++
   Q: 356 LAILEG-HTGPVKCLTaatdcynpsNTSTSYLVYSGSLDCDIKVWQI 401
    *****9.*********998886665555559999***********86 PP
   

Organism Vitis vinifera
Protein Sequence
(Fasta)
MSAHQPSHSG DYSASQFFHV QSELISLSSQ PSLPSVPSLT SQTQQQQLYL PSTTTTHHCV 60
TTFKGHTSYV SSLALAGNFL FSGSSDKEIR LWEQNLNSEL DHENISNNVV AVGKGAVKSM 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Vvi-131013|E3,WD_repeat;UBD,Beta-Prp|Vitis vinifera
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTCAGCCC ATCAACCTAG TCATTCAGGT GATTATTCTG CATCTCAATT CTTTCATGTT 60
CAATCAGAGC TAATCTCCCT CTCTTCCCAG CCAAGCTTAC CATCAGTTCC TTCCCTCACC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Vvi-131013|E3,WD_repeat;UBD,Beta-Prp|Vitis vinifera
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-005752 Arabidopsis lyrata 58.24 3.00e-111 394.00
IUUC-Ath-006904 Arabidopsis thaliana 60.57 2.00e-110 391.00
IUUC-Bra-017764 Brassica rapa 59.22 7.00e-104 369.00
IUUC-Gma-043330 Glycine max 66.57 1.00e-133 468.00
IUUC-Mtr-058389 Medicago truncatula 63.82 1.00e-117 415.00
IUUC-Pop-099892 Populus trichocarpa 78.53 1.00e-152 531.00
IUUC-Ppe-101853 Prunus persica 71.55 4.00e-142 496.00
IUUC-Sly-111471 Solanum lycopersicum 64.81 5.00e-127 446.00
IUUC-Stu-112792 Solanum tuberosum 64.29 5.00e-124 436.00
Created Date 25-Jun-2017

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