iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110113

Ensembl Protein ID

Si029090m

UniProt Accession

K3ZR60; K3ZR60_SETIT

Genbank Protein ID

KQL24329.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM003529

Gene Name

LOC101772081; SETIT_029090mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si029090m.g	Si029090m	Si029090m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.70e-26	91.6	292	363

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           p+++ CpI+l+lM+dPv++++G+tydr+sI +w++ g +tcPvt+++l+  d+vPn +lr +i++ + +n++
   Q: 292  PDALQCPITLDLMTDPVTVSTGQTYDRASITRWIKAGCRTCPVTGERLRTADVVPNAALRGIIERMLLSNGV 363
           899*************************************************************99888875 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MPPPSPPPPT GEPKRRRLLS LPAVCPCEGI APAPLLASLL SLATDLASRG AGDAGAFLVL 60
RRGMRQVVRI AGLLLAFLEE IQDASVAPTL PSAAVLGLTE LHVAMQKLRF LLTDCARRGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGTTTTATG TGCCCGCTCC CCTTCTTCGA CGGTTACCAG CTTCACCGTC AATGCCGCCG 60
CCGTCGCCGC CGCCACCAAC AGGCGAACCG AAGCGCCGAC GCCTGCTCTC CCTCCCGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sita:101772081

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000617	Aegilops tauschii	71.61	0.00e+00	632.00
IUUC-Atr-002640	Amborella trichopoda	35.58	5.00e-88	318.00
IUUC-Aly-006337	Arabidopsis lyrata	37.76	3.00e-111	395.00
IUUC-Ath-007598	Arabidopsis thaliana	35.95	1.00e-106	380.00
IUUC-Bdi-014095	Brachypodium distachyon	73.39	0.00e+00	840.00
IUUC-Bol-015964	Brassica oleracea	36.40	1.00e-103	369.00
IUUC-Bra-017789	Brassica rapa	37.08	6.00e-100	357.00
IUUC-Gma-043679	Glycine max	37.98	4.00e-121	427.00
IUUC-Hvu-047204	Hordeum vulgare	73.36	0.00e+00	888.00
IUUC-Lpe-051010	Leersia perrieri	72.01	0.00e+00	704.00
IUUC-Mtr-058647	Medicago truncatula	36.83	1.00e-118	419.00
IUUC-Mac-064527	Musa acuminata	52.97	7.00e-93	333.00
IUUC-Obr-076695	Oryza brachyantha	75.06	2.00e-159	554.00
IUUC-Ogl-076995	Oryza glaberrima	73.40	0.00e+00	719.00
IUUC-Oin-079752	Oryza indica	73.86	0.00e+00	739.00
IUUC-Ome-081268	Oryza meridionalis	73.96	0.00e+00	750.00
IUUC-Oni-082928	Oryza nivara	73.51	0.00e+00	719.00
IUUC-Opu-084107	Oryza punctata	75.37	0.00e+00	766.00
IUUC-Oru-084651	Oryza rufipogon	73.81	0.00e+00	721.00
IUUC-Osa-085940	Oryza sativa	73.81	0.00e+00	721.00
IUUC-Pop-099290	Populus trichocarpa	39.20	3.00e-127	448.00
IUUC-Ppe-102097	Prunus persica	39.52	8.00e-127	446.00
IUUC-Sly-111836	Solanum lycopersicum	38.37	1.00e-125	443.00
IUUC-Stu-112861	Solanum tuberosum	38.17	1.00e-125	442.00
IUUC-Sbi-114188	Sorghum bicolor	82.80	0.00e+00	984.00
IUUC-Tca-121206	Theobroma cacao	39.49	8.00e-137	480.00
IUUC-Tae-125504	Triticum aestivum	72.77	0.00e+00	888.00
IUUC-Tur-126514	Triticum urartu	67.35	0.00e+00	693.00
IUUC-Vvi-130884	Vitis vinifera	42.07	2.00e-127	449.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence