iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-130967

Ensembl Protein ID

VIT_17s0000g08730.t01

UniProt Accession

D7SHP1; D7SHP1_VITVI

Genbank Protein ID

CBI15001.3

Protein Name

Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B

Genbank Nucleotide ID

FN594950

Gene Name

VIT_17s0000g08730

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_17s0000g08730	VIT_17s0000g08730.t01	VIT_17s0000g08730.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.60e-13	49.1	109	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf...sd.tllvsGsdDgtikvWDlrtgvll 36
           +++ +++   ++  l++ +++D+tik+W ++++++ 
   Q: 109  KINKVRWcatPNeSLFILSTNDKTIKLWKVKDHKPK 144
           7999******776999999***********999876 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MTLTTDSSSS LQWKFSQAFG ERAPGEDVQD IDMISAMEFE KSGDYLAVGD RGGRVVVFER 60
KDEKDWHSRN ELEQLDFTTI QHPIFHYKTE FQSHEPEFDY LRSLEIEEKI NKVRWCATPN 120

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Nucleotide Sequence
(Fasta)

ATGACTCTCA CTACGGACTC TTCCTCTTCC TTGCAATGGA AGTTTTCTCA GGCTTTCGGC 60
GAACGAGCTC CTGGAGAAGA CGTTCAAGAT AGTAAGGGTT TCTGCTTCTC ATTCTCTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR000009--PP2A_PR55
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

PRINTS

PR00600--PP2APR55

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0000159--C:protein phosphatase type 2A complex
GO:0019888--F:protein phosphatase regulator activity
GO:0032502--P:developmental process
GO:0000278--P:mitotic cell cycle
GO:0070262--P:peptidyl-serine dephosphorylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002606	Amborella trichopoda	61.92	0.00e+00	632.00
IUUC-Pop-099518	Populus trichocarpa	71.86	0.00e+00	706.00
IUUC-Ppe-101344	Prunus persica	74.02	0.00e+00	705.00
IUUC-Sly-111818	Solanum lycopersicum	64.72	5.00e-174	603.00
IUUC-Stu-112614	Solanum tuberosum	64.11	6.00e-173	599.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence