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Tag Content
iUUCD ID IUUC-Lch-050529
Ensembl Protein ID ENSLACP00000021436.1
UniProt Accession H3BHR5; H3BHR5_LATCH
Genbank Protein ID ENSLACP00000021436
Protein Name Uncharacterized protein
Genbank Nucleotide ID AFYH01008681
Gene Name RABGEF1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000018835.2 ENSLACT00000021576.2 ENSLACP00000021435.2
ENSLACG00000018835.2 ENSLACT00000021577.1 ENSLACP00000021436.1
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/ZnF/ZnF_A20 1.30e-18 66.8 13 47
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/ZnF/ZnF_A20
   S: 1    dpskllCkkgCgfYGnpetngyCSkCyreelrrrr 35
           d+s+llCkkgCg+YGnp+++g+CSkC+ree++++r
   Q: 13   DQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKAR 47
           79*******************************86 PP
   
Organism Latimeria chalumnae
Protein Sequence
(Fasta)
MSLKSERRGI HVDQSELLCK KGCGYYGNPA WQGFCSKCWR EEYHKARQKQ IQEDWELAER 60
ISVGSLFHNF GLTTAIALSP VEKSSLELIL HSNPKLSRSL KLQREEEAAY ASSKGAQSLT 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Lch-050529|UBD,ZnF_A20|Latimeria chalumnae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGGGTTATAT TACGTCAGGG GAAGCGCTAG AGGAAAAAAG CGGAGGGGGT GGGCGCGGTT 60
ATAGCGTCAC GGGAGGTGCT CGAGCGAAGA CAGGGGAGGG AAACGGGCGG GGCTGCGGCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Lch-050529|UBD,ZnF_A20|Latimeria chalumnae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR003123--VPS9
IPR002653--Znf_A20
PROSITE

PS51205--VPS9
PS51036--ZF_A20
Pfam

PF02204--VPS9
PF01754--zf-A20
SMART

SM00167--VPS9
SM00259--ZnF_A20
Gene Ontology

GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000198 Aegilops tauschii 32.82 5.00e-23 102.00
IUUC-Aml-001771 Ailuropoda melanoleuca 74.31 0.00e+00 782.00
IUUC-Atr-003154 Amborella trichopoda 33.33 3.00e-26 112.00
IUUC-Apl-004018 Anas platyrhynchos 77.49 0.00e+00 788.00
IUUC-Aca-005227 Anolis carolinensis 26.28 3.00e-09 57.40
IUUC-Aly-006138 Arabidopsis lyrata 33.60 6.00e-28 118.00
IUUC-Ath-006747 Arabidopsis thaliana 33.20 7.00e-28 118.00
IUUC-Ago-007776 Ashbya gossypii 26.78 9.00e-22 97.80
IUUC-Acl-008235 Aspergillus clavatus 31.47 6.00e-31 129.00
IUUC-Afl-008570 Aspergillus flavus 32.29 3.00e-33 137.00
IUUC-Afu-008815 Aspergillus fumigatus 30.35 2.00e-31 130.00
IUUC-Ani-009381 Aspergillus nidulans 30.77 3.00e-31 130.00
IUUC-Ang-009615 Aspergillus niger 29.80 6.00e-34 138.00
IUUC-Aor-010195 Aspergillus oryzae 32.19 1.00e-33 137.00
IUUC-Ate-010514 Aspergillus terreus 33.10 3.00e-32 133.00
IUUC-Ame-011365 Astyanax mexicanus 70.99 1.00e-167 582.00
IUUC-Bgr-012102 Blumeria graminis 29.50 4.00e-32 132.00
IUUC-Bta-013124 Bos taurus 84.24 0.00e+00 683.00
IUUC-Bci-013943 Botrytis cinerea 32.75 5.00e-33 135.00
IUUC-Bdi-014539 Brachypodium distachyon 35.69 2.00e-29 123.00
IUUC-Bol-016580 Brassica oleracea 36.36 5.00e-33 135.00
IUUC-Bra-017843 Brassica rapa 36.22 1.00e-33 137.00
IUUC-Cel-018199 Caenorhabditis elegans 40.93 6.00e-47 181.00
IUUC-Cja-019941 Callithrix jacchus 84.24 0.00e+00 683.00
IUUC-Cfa-020845 Canis familiaris 83.98 0.00e+00 682.00
IUUC-Cpo-022037 Cavia porcellus 82.69 0.00e+00 676.00
IUUC-Cre-022696 Chlamydomonas reinhardtii 30.27 2.00e-22 100.00
IUUC-Csa-023495 Chlorocebus sabaeus 85.01 0.00e+00 687.00
IUUC-Cho-025076 Choloepus hoffmanni 86.56 3.00e-168 584.00
IUUC-Cin-025400 Ciona intestinalis 43.85 6.00e-117 414.00
IUUC-Csv-025941 Ciona savignyi 40.52 2.00e-92 333.00
IUUC-Cgl-026725 Colletotrichum gloeosporioides 30.88 9.00e-30 125.00
IUUC-Cne-027057 Cryptococcus neoformans 33.44 4.00e-36 146.00
IUUC-Dre-028484 Danio rerio 66.30 0.00e+00 676.00
IUUC-Dno-028906 Dasypus novemcinctus 85.41 0.00e+00 681.00
IUUC-Dor-030124 Dipodomys ordii 72.09 5.00e-164 570.00
IUUC-Dse-031437 Dothistroma septosporum 30.14 8.00e-29 122.00
IUUC-Dme-031696 Drosophila melanogaster 39.34 7.00e-61 228.00
IUUC-Ete-032573 Echinops telfairi 82.67 0.00e+00 657.00
IUUC-Eca-033711 Equus caballus 84.93 0.00e+00 684.00
IUUC-Eeu-034459 Erinaceus europaeus 59.13 3.00e-63 236.00
IUUC-Fca-035447 Felis catus 83.33 0.00e+00 691.00
IUUC-Fal-036605 Ficedula albicollis 76.38 0.00e+00 750.00
IUUC-Fox-037967 Fusarium oxysporum 28.00 1.00e-21 98.60
IUUC-Fso-038110 Fusarium solani 30.63 9.00e-32 132.00
IUUC-Gmo-038785 Gadus morhua 62.73 0.00e+00 671.00
IUUC-Ggr-039760 Gaeumannomyces graminis 31.64 3.00e-30 126.00
IUUC-Gga-040584 Gallus gallus 78.95 0.00e+00 802.00
IUUC-Gac-042317 Gasterosteus aculeatus 67.10 8.00e-140 489.00
IUUC-Gma-044237 Glycine max 37.64 1.00e-26 114.00
IUUC-Ggo-044498 Gorilla gorilla 70.03 6.00e-159 553.00
IUUC-Hsa-046625 Homo sapiens 84.24 0.00e+00 682.00
IUUC-Hvu-047155 Hordeum vulgare 35.29 2.00e-29 123.00
IUUC-Itr-048753 Ictidomys tridecemlineatus 83.98 0.00e+00 683.00
IUUC-Kpa-049160 Komagataella pastoris 30.00 2.00e-25 110.00
IUUC-Lpe-051024 Leersia perrieri 33.11 2.00e-30 127.00
IUUC-Loc-052644 Lepisosteus oculatus 74.34 5.00e-168 583.00
IUUC-Lma-053102 Leptosphaeria maculans 31.48 2.00e-30 127.00
IUUC-Laf-054337 Loxodonta africana 77.44 0.00e+00 785.00
IUUC-Mcc-055659 Macaca mulatta 84.56 2.00e-129 455.00
IUUC-Meu-056084 Macropus eugenii 70.59 1.00e-86 313.00
IUUC-Mor-057255 Magnaporthe oryzae 30.55 2.00e-29 124.00
IUUC-Mpo-057454 Magnaporthe poae 31.64 5.00e-32 132.00
IUUC-Mtr-058098 Medicago truncatula 36.72 3.00e-34 139.00
IUUC-Mla-059068 Melampsora laricipopulina 30.27 5.00e-33 135.00
IUUC-Mga-059624 Meleagris gallopavo 74.48 0.00e+00 816.00
IUUC-Mvi-060282 Microbotryum violaceum 28.09 4.00e-26 113.00
IUUC-Mmr-061142 Microcebus murinus 78.38 0.00e+00 789.00
IUUC-Mdo-062289 Monodelphis domestica 82.85 0.00e+00 715.00
IUUC-Mmu-063961 Mus musculus 82.95 0.00e+00 672.00
IUUC-Mac-065188 Musa acuminata 34.90 1.00e-27 117.00
IUUC-Mpu-066291 Mustela putorius furo 83.46 0.00e+00 682.00
IUUC-Mlu-067431 Myotis lucifugus 75.75 0.00e+00 752.00
IUUC-Nfi-068422 Neosartorya fischeri 31.13 4.00e-32 133.00
IUUC-Ncr-068843 Neurospora crassa 30.99 1.00e-31 131.00
IUUC-Nle-069079 Nomascus leucogenys 84.50 0.00e+00 683.00
IUUC-Opr-070790 Ochotona princeps 77.78 5.00e-47 182.00
IUUC-Ont-071789 Oreochromis niloticus 63.18 4.00e-180 624.00
IUUC-Oan-072946 Ornithorhynchus anatinus 81.90 0.00e+00 651.00
IUUC-Ocu-073816 Oryctolagus cuniculus 84.50 0.00e+00 683.00
IUUC-Oba-075738 Oryza barthii 32.16 5.00e-21 95.50
IUUC-Obr-076355 Oryza brachyantha 36.18 7.00e-30 124.00
IUUC-Ogl-077217 Oryza glaberrima 35.00 4.00e-28 119.00
IUUC-Ogu-078197 Oryza glumaepatula 31.10 4.00e-30 125.00
IUUC-Oin-080047 Oryza indica 35.69 9.00e-30 124.00
IUUC-Olo-080317 Oryza longistaminata 31.10 4.00e-30 125.00
IUUC-Ome-081589 Oryza meridionalis 35.69 2.00e-30 127.00
IUUC-Oni-082700 Oryza nivara 32.16 5.00e-21 95.50
IUUC-Opu-083923 Oryza punctata 34.36 2.00e-21 96.30
IUUC-Oru-084318 Oryza rufipogon 32.16 5.00e-21 95.50
IUUC-Osa-086246 Oryza sativa 38.33 4.00e-06 42.40
IUUC-Ola-086334 Oryzias latipes 60.07 5.00e-173 600.00
IUUC-Olu-087719 Ostreococcus lucimarinus 33.85 3.00e-25 108.00
IUUC-Oga-088992 Otolemur garnettii 76.31 0.00e+00 817.00
IUUC-Oar-089789 Ovis aries 84.28 0.00e+00 681.00
IUUC-Ptr-091636 Pan troglodytes 84.24 0.00e+00 681.00
IUUC-Pan-092911 Papio anubis 84.75 0.00e+00 685.00
IUUC-Psi-093194 Pelodiscus sinensis 74.44 0.00e+00 820.00
IUUC-Pma-094212 Petromyzon marinus 45.83 4.00e-115 408.00
IUUC-Pno-094831 Phaeosphaeria nodorum 31.33 1.00e-30 128.00
IUUC-Ppa-095705 Physcomitrella patens 31.01 2.00e-31 130.00
IUUC-Pfo-096694 Poecilia formosa 61.09 5.00e-179 620.00
IUUC-Pab-097706 Pongo abelii 84.50 0.00e+00 682.00
IUUC-Pop-099891 Populus trichocarpa 35.94 2.00e-29 124.00
IUUC-Pca-100879 Procavia capensis 79.63 2.00e-81 295.00
IUUC-Ppe-101334 Prunus persica 33.86 1.00e-29 124.00
IUUC-Pva-103225 Pteropus vampyrus 79.15 2.00e-155 542.00
IUUC-Pgr-103564 Puccinia graminis 32.64 2.00e-32 134.00
IUUC-Ptt-103802 Puccinia triticina 30.28 4.00e-28 119.00
IUUC-Pte-104345 Pyrenophora teres 29.81 3.00e-30 127.00
IUUC-Pyt-104716 Pyrenophora triticirepentis 29.79 9.00e-31 128.00
IUUC-Rno-106101 Rattus norvegicus 83.46 0.00e+00 677.00
IUUC-Sce-106460 Saccharomyces cerevisiae 30.00 5.00e-25 108.00
IUUC-Sha-106919 Sarcophilus harrisii 72.43 0.00e+00 796.00
IUUC-Sja-107880 Schizosaccharomyces japonicus 32.33 4.00e-33 135.00
IUUC-Spo-108087 Schizosaccharomyces pombe 30.23 1.00e-28 120.00
IUUC-Ssl-108614 Sclerotinia sclerotiorum 29.82 8.00e-08 52.40
IUUC-Smo-109411 Selaginella moellendorffii 33.47 3.00e-30 125.00
IUUC-Sit-110678 Setaria italica 35.29 6.00e-30 125.00
IUUC-Sly-111526 Solanum lycopersicum 34.65 2.00e-27 116.00
IUUC-Stu-112494 Solanum tuberosum 35.97 2.00e-28 120.00
IUUC-Sar-112929 Sorex araneus 90.55 7.00e-151 527.00
IUUC-Sbi-114242 Sorghum bicolor 34.35 8.00e-34 137.00
IUUC-Sre-115224 Sporisorium reilianum 32.04 7.00e-32 132.00
IUUC-Ssc-115239 Sus scrofa 84.24 0.00e+00 684.00
IUUC-Tgu-117499 Taeniopygia guttata 77.26 0.00e+00 781.00
IUUC-Tru-118027 Takifugu rubripes 61.09 2.00e-172 598.00
IUUC-Tsy-119462 Tarsius syrichta 77.95 0.00e+00 763.00
IUUC-Tni-120855 Tetraodon nigroviridis 56.17 3.00e-175 607.00
IUUC-Tca-121213 Theobroma cacao 33.59 3.00e-28 119.00
IUUC-Tre-122186 Trichoderma reesei 30.82 3.00e-32 133.00
IUUC-Tvi-122541 Trichoderma virens 30.82 3.00e-30 126.00
IUUC-Tae-122942 Triticum aestivum 36.47 2.00e-30 127.00
IUUC-Tur-126572 Triticum urartu 39.25 6.00e-29 122.00
IUUC-Tme-127023 Tuber melanosporum 33.20 1.00e-33 138.00
IUUC-Tbe-127453 Tupaia belangeri 84.24 0.00e+00 685.00
IUUC-Ttr-128526 Tursiops truncatus 83.98 0.00e+00 682.00
IUUC-Uma-129660 Ustilago maydis 34.24 1.00e-32 135.00
IUUC-Vda-129737 Verticillium dahliae 30.53 2.00e-26 114.00
IUUC-Vpa-130505 Vicugna pacos 78.55 3.00e-179 621.00
IUUC-Vvi-131088 Vitis vinifera 34.78 9.00e-26 111.00
IUUC-Xtr-132799 Xenopus tropicalis 73.32 0.00e+00 743.00
IUUC-Xma-133345 Xiphophorus maculatus 61.12 4.00e-176 610.00
IUUC-Yli-134416 Yarrowia lipolytica 31.48 5.00e-32 132.00
IUUC-Zma-134750 Zea mays 33.81 1.00e-29 124.00
Created Date 25-Jun-2017

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