iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cpo-021636

Ensembl Protein ID

ENSCPOP00000007376.2

UniProt Accession

H0VBT5; H0VBT5_CAVPO

Genbank Protein ID

ENSCPOP00000007376

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02011958

Gene Name

LRBA

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000008202.3	ENSCPOT00000008277.2	ENSCPOP00000007376.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.20e-07	29.3	2708	2743

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           + d ++++++  d  +l++G+d g+++vW +++ ++
   Q: 2708 TDDHIRAMQLsRDgQYLLTGGDSGVVRVWQVSDLRQ 2743
           66779999999778***************9988766 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

LVGGQFDLEM NFIIQEGESI ICMVDLLEKC DITCQAEVWS MFTAILKKSI RNLQICAEVG 60
LVEKVLGKIE KVDNMIAVLD LLVDMLGVLA SYNLTVRELK LFFSKLQGDK GQWPPHAGKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGGTAGGGG GGCAGTTTGA TTTGGAGATG AATTTCATTA TCCAAGAAGG AGAGAGTATC 60
ATCTGCATGG TCGACCTCCT GGAGAAGTGT GACATCACCT GTCAAGCAGA GGTCTGGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR010508--DUF1088
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF06469--DUF1088
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Gene Ontology

GO:0016020--C:membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000339	Aegilops tauschii	39.92	1.00e-144	507.00
IUUC-Atr-002998	Amborella trichopoda	38.38	4.00e-138	487.00
IUUC-Apl-003632	Anas platyrhynchos	82.00	0.00e+00	844.00
IUUC-Aca-005124	Anolis carolinensis	78.34	0.00e+00	4389.00
IUUC-Aly-005407	Arabidopsis lyrata	38.26	7.00e-139	488.00
IUUC-Ath-007674	Arabidopsis thaliana	38.12	9.00e-138	486.00
IUUC-Ame-011487	Astyanax mexicanus	67.81	1.00e-171	595.00
IUUC-Bta-012509	Bos taurus	84.65	0.00e+00	4721.00
IUUC-Bdi-014244	Brachypodium distachyon	39.52	6.00e-140	493.00
IUUC-Bol-015261	Brassica oleracea	38.26	4.00e-134	473.00
IUUC-Bra-016877	Brassica rapa	38.12	3.00e-133	471.00
IUUC-Cja-018744	Callithrix jacchus	94.66	0.00e+00	1504.00
IUUC-Cfa-020786	Canis familiaris	87.87	0.00e+00	4920.00
IUUC-Ete-032481	Echinops telfairi	89.69	0.00e+00	1306.00
IUUC-Eca-033893	Equus caballus	87.24	0.00e+00	4895.00
IUUC-Fca-035726	Felis catus	94.55	0.00e+00	1001.00
IUUC-Fal-036871	Ficedula albicollis	77.57	0.00e+00	4356.00
IUUC-Gga-041206	Gallus gallus	77.64	0.00e+00	4435.00
IUUC-Gma-042772	Glycine max	39.03	4.00e-142	501.00
IUUC-Hsa-045763	Homo sapiens	68.19	0.00e+00	743.00
IUUC-Hvu-047772	Hordeum vulgare	39.65	5.00e-142	499.00
IUUC-Itr-048852	Ictidomys tridecemlineatus	89.45	0.00e+00	5012.00
IUUC-Lch-050027	Latimeria chalumnae	84.62	0.00e+00	1372.00
IUUC-Lpe-050958	Leersia perrieri	39.41	4.00e-142	499.00
IUUC-Loc-052771	Lepisosteus oculatus	76.94	0.00e+00	2455.00
IUUC-Laf-053724	Loxodonta africana	87.67	0.00e+00	4921.00
IUUC-Mcc-055200	Macaca mulatta	94.39	0.00e+00	1506.00
IUUC-Mtr-058372	Medicago truncatula	37.55	2.00e-134	475.00
IUUC-Mga-059851	Meleagris gallopavo	88.71	0.00e+00	1672.00
IUUC-Mmr-061112	Microcebus murinus	88.63	0.00e+00	4987.00
IUUC-Mdo-062727	Monodelphis domestica	81.27	0.00e+00	4099.00
IUUC-Mmu-064194	Mus musculus	95.56	0.00e+00	1518.00
IUUC-Mac-064991	Musa acuminata	36.04	8.00e-142	499.00
IUUC-Mpu-066074	Mustela putorius furo	87.59	0.00e+00	4907.00
IUUC-Mlu-067308	Myotis lucifugus	85.15	0.00e+00	4732.00
IUUC-Oan-073413	Ornithorhynchus anatinus	92.51	0.00e+00	1489.00
IUUC-Ocu-074483	Oryctolagus cuniculus	88.50	0.00e+00	2322.00
IUUC-Oba-075426	Oryza barthii	41.08	5.00e-143	503.00
IUUC-Obr-076907	Oryza brachyantha	40.41	4.00e-142	500.00
IUUC-Ogl-077620	Oryza glaberrima	35.95	5.00e-134	472.00
IUUC-Ogu-078751	Oryza glumaepatula	41.27	4.00e-144	506.00
IUUC-Oin-079673	Oryza indica	35.95	1.00e-134	475.00
IUUC-Olo-080417	Oryza longistaminata	35.95	5.00e-134	474.00
IUUC-Ome-081931	Oryza meridionalis	40.59	5.00e-143	503.00
IUUC-Oni-082349	Oryza nivara	41.08	4.00e-143	503.00
IUUC-Oru-085197	Oryza rufipogon	40.95	1.00e-142	502.00
IUUC-Ola-087242	Oryzias latipes	72.18	0.00e+00	2105.00
IUUC-Olu-087890	Ostreococcus lucimarinus	34.69	4.00e-118	418.00
IUUC-Oga-088409	Otolemur garnettii	90.42	0.00e+00	2754.00
IUUC-Oar-089217	Ovis aries	87.16	0.00e+00	4890.00
IUUC-Ppa-095295	Physcomitrella patens	37.85	5.00e-141	496.00
IUUC-Pop-099604	Populus trichocarpa	37.67	6.00e-137	483.00
IUUC-Pca-100240	Procavia capensis	79.22	0.00e+00	1632.00
IUUC-Ppe-101836	Prunus persica	36.93	3.00e-139	490.00
IUUC-Rno-104971	Rattus norvegicus	95.70	0.00e+00	1608.00
IUUC-Sha-107387	Sarcophilus harrisii	82.56	0.00e+00	4650.00
IUUC-Sit-110075	Setaria italica	39.11	1.00e-138	488.00
IUUC-Sly-111033	Solanum lycopersicum	38.44	4.00e-139	489.00
IUUC-Sbi-113954	Sorghum bicolor	50.62	1.00e-108	387.00
IUUC-Tgu-117304	Taeniopygia guttata	77.77	0.00e+00	4128.00
IUUC-Tru-118226	Takifugu rubripes	71.81	0.00e+00	1171.00
IUUC-Tni-120595	Tetraodon nigroviridis	63.86	0.00e+00	994.00
IUUC-Tca-121572	Theobroma cacao	38.47	3.00e-142	501.00
IUUC-Tur-126212	Triticum urartu	39.52	1.00e-141	499.00
IUUC-Ttr-128452	Tursiops truncatus	84.65	0.00e+00	4640.00
IUUC-Vvi-130860	Vitis vinifera	38.96	6.00e-139	490.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence