iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015732

Ensembl Protein ID

Bo9g018860.1

UniProt Accession

A0A0D3E2D5; A0A0D3E2D5_BRAOL

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo9g018860	Bo9g018860.1	Bo9g018860.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	2.70e-16	61.0	196	296

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt.........................elknsevalkYeDedGDlvtlksDedldkavsllas 72
           ++vkvs++g+++++++dl++++++ +L +a+++ +t                          l+++++ l+YeD+dGD++ l++D++++++++    
   Q: 196  LFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKmFTtftlgqcgsngaagkdmlsetklknLLNGKDYVLTYEDKDGDWM-LVGDVPWEMFID---- 287
           58*******************************844688******************99988899***************.************.... PP
   S: 73   kksllrlliqk 83
              +++l i+k
   Q: 288  --VCKKLKIMK 296
           ..688888876 PP

Organism

Brassica oleracea

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MLSEEELQSN VSVASSPTSN CISKGGGLKV HNYFGLSDSS SVESSTLSGN VEDDKATISL 60
KATELTLGLP GSQSPARETE LDEKPFFPLL PTKDEIFSSS QKNIASGNKR GFSDTMYTEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTATCAG AAGAGGAGCT ACAGAGCAAT GTCTCTGTAG CTAGTTCACC TACTAGCAAC 60
TGCATCTCTA AAGGAGGAGG ACTCAAGGTG CATAACTACT TTGGTCTCTC TGATTCCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002534	Amborella trichopoda	50.83	8.00e-85	306.00
IUUC-Aly-005481	Arabidopsis lyrata	84.32	2.00e-142	497.00
IUUC-Ath-007607	Arabidopsis thaliana	84.62	2.00e-142	498.00
IUUC-Gma-043506	Glycine max	63.53	6.00e-106	376.00
IUUC-Mtr-058323	Medicago truncatula	59.77	2.00e-101	362.00
IUUC-Mac-064563	Musa acuminata	53.95	3.00e-76	278.00
IUUC-Ome-081266	Oryza meridionalis	56.21	2.00e-47	181.00
IUUC-Opu-083799	Oryza punctata	47.58	2.00e-46	179.00
IUUC-Pop-099102	Populus trichocarpa	54.87	7.00e-93	333.00
IUUC-Ppe-101672	Prunus persica	58.49	3.00e-102	364.00
IUUC-Smo-109586	Selaginella moellendorffii	50.58	4.00e-41	161.00
IUUC-Sly-111221	Solanum lycopersicum	47.12	2.00e-62	231.00
IUUC-Stu-112219	Solanum tuberosum	56.85	1.00e-89	322.00
IUUC-Sbi-114334	Sorghum bicolor	48.65	3.00e-53	201.00
IUUC-Tca-121767	Theobroma cacao	60.54	5.00e-103	367.00
IUUC-Vvi-131708	Vitis vinifera	55.56	1.00e-82	300.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence