iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mac-065282

Ensembl Protein ID

GSMUA_Achr3P30740_001

UniProt Accession

M0SJ88; M0SJ88_MUSAM

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSMUA_Achr3G30740_001	GSMUA_Achr3T30740_001	GSMUA_Achr3P30740_001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-24	84.5	136	173
UBD/Beta-Prp	7.30e-44	151.0	136	322

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H+d ++cl++  + +ll sGs+D t k+W++++ ++l 
   Q: 136  HSDAISCLSLnEEqGLLYSGSWDRTFKIWRISDSRCLE 173
           9*********63379****************9999986 PP

UBD/Beta-Prp

   S: 51   heaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.....tl 133
           h+++++++++++++ +l +gs Drt k+w +s++ c+ ++ +h+d++ s+     +  + +Gs+d t++vw  e   +  +     tl
   Q: 136  HSDAISCLSLNEEQGLLYSGSWDRTFKIWRISDSRCLESVVAHDDTINSIVAAV-SGLVFTGSADGTVKVWRRELHGKGTKhapvqTL 222
           9************************************************99888.78999***********76643333335788866 PP
   S: 134  sghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrtltgghtdsvyslsfdsng............kelvsgsldgtvklw 207
            +++ +  ++++  +gnll sGs+D+t+ +W+   +  ++l  l+g h ++v++l+  ++               + sgsld++vklw
   Q: 223  LKQEWAMAVLCLVASGNLLLSGSADTTICVWRRegAVHTCLSVLSG-HAGPVKCLATAPDAggdedggsgatrWTVYSGSLDKSVKLW 309
           6666677777777777***************9988899******99.*********7777777777888888899************* PP
   S: 208  dlqtgecvrtlng 220
            ++++     l+g
   Q: 310  RVSEQAPEALLRG 322
           **98776655555 PP

Organism

Musa acuminata

Protein Sequence
(Fasta)

MAVSREHSPY DAELPSTAPA GSLVLEKGNI HSLAATGCLL YGGFDSKNIR VWKNQQDFAE 60
FKSSSGFVKA IVVAADRVFT GHQDGKIRAW KVSPKDATVY KRIGNLPRLK DILWSSLNPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGTGA GCCGTGAGCA TTCCCCGTAC GACGCCGAGC TTCCCAGCAC CGCGCCCGCC 60
GGCTCCCTGG TGCTCGAGAA GGGTAACATC CACTCGCTCG CAGCCACCGG CTGCCTCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014024	Brachypodium distachyon	56.82	1.00e-107	382.00
IUUC-Lpe-051623	Leersia perrieri	55.26	2.00e-102	365.00
IUUC-Oba-075783	Oryza barthii	56.27	5.00e-106	377.00
IUUC-Obr-076198	Oryza brachyantha	55.99	2.00e-104	372.00
IUUC-Ogl-077280	Oryza glaberrima	56.27	5.00e-106	377.00
IUUC-Oin-079931	Oryza indica	56.55	1.00e-106	379.00
IUUC-Oni-082948	Oryza nivara	56.55	1.00e-106	379.00
IUUC-Oru-084999	Oryza rufipogon	56.55	1.00e-106	379.00
IUUC-Osa-085749	Oryza sativa	56.55	1.00e-106	379.00
IUUC-Pop-099814	Populus trichocarpa	57.48	1.00e-93	336.00
IUUC-Sit-109859	Setaria italica	55.56	3.00e-93	335.00
IUUC-Stu-112114	Solanum tuberosum	52.06	1.00e-92	332.00
IUUC-Sbi-114260	Sorghum bicolor	55.65	6.00e-103	367.00
IUUC-Tca-121487	Theobroma cacao	51.01	2.00e-98	352.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence