iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109214

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377592

Gene Name

SELMODRAFT_442810

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_442810	EFJ23642	EFJ23642

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.70e-07	30.9	100	142

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+d+   ++ +  lp C H+fh +C+  w        ++ +CP+Cr
   Q: 100  CAVCLSDYqpgEK-LQQLPvCDHIFHVECIDEW------LANNSTCPICR 142
           ********66433.666668*************......**********8 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MSDQNPCTTP SCAPQLKFYQ AFTFATPIIF TLVLLLLFCV LYVRRRQTAR AVSQLRAQFF 60
ARGIFSAWPV DHGLTKSFRA TLPTIVFDES FAASREDNQC AVCLSDYQPG EKLQQLPVCD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCATTCTTGC TGTTCACTGC TGCGCCCAGA TCTAATCACT GGCGCTCTGG CGCGATGGAG 60
CACGGGAGGA GGAGGAGGAG CCAGCGACGA TTCTTGGAGT GAAAATCTCG AATCCCTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

smo:SELMODRAFT_442810

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002798	Amborella trichopoda	54.55	2.00e-17	82.00
IUUC-Aly-005500	Arabidopsis lyrata	44.78	1.00e-27	115.00
IUUC-Ang-009544	Aspergillus niger	51.02	5.00e-12	65.90
IUUC-Bdi-014087	Brachypodium distachyon	47.26	1.00e-25	108.00
IUUC-Bol-016221	Brassica oleracea	46.97	1.00e-27	115.00
IUUC-Cel-018152	Caenorhabditis elegans	41.67	1.00e-12	64.70
IUUC-Cpo-022086	Cavia porcellus	49.35	4.00e-15	75.90
IUUC-Cho-024749	Choloepus hoffmanni	51.43	5.00e-15	75.50
IUUC-Dno-029617	Dasypus novemcinctus	51.43	8.00e-15	74.70
IUUC-Ete-032882	Echinops telfairi	48.65	6.00e-14	72.00
IUUC-Lpe-051002	Leersia perrieri	44.52	5.00e-25	106.00
IUUC-Laf-054296	Loxodonta africana	50.00	3.00e-14	72.80
IUUC-Mtr-058067	Medicago truncatula	57.33	4.00e-23	100.00
IUUC-Oba-075393	Oryza barthii	45.21	4.00e-25	107.00
IUUC-Obr-076149	Oryza brachyantha	45.21	4.00e-25	107.00
IUUC-Ogl-077140	Oryza glaberrima	45.21	4.00e-25	107.00
IUUC-Ogu-078926	Oryza glumaepatula	45.21	4.00e-25	107.00
IUUC-Oni-082750	Oryza nivara	45.21	4.00e-25	107.00
IUUC-Opu-083446	Oryza punctata	45.21	4.00e-25	107.00
IUUC-Oru-084873	Oryza rufipogon	45.21	4.00e-25	107.00
IUUC-Osa-085898	Oryza sativa	45.21	4.00e-25	107.00
IUUC-Pca-100143	Procavia capensis	51.35	8.00e-15	74.70
IUUC-Rno-105745	Rattus norvegicus	45.35	6.00e-15	75.10
IUUC-Sce-106307	Saccharomyces cerevisiae	50.00	5.00e-08	50.80
IUUC-Sit-110610	Setaria italica	46.62	3.00e-24	104.00
IUUC-Sbi-114101	Sorghum bicolor	47.37	3.00e-25	107.00
IUUC-Ssc-115345	Sus scrofa	45.35	4.00e-14	72.40
IUUC-Tsy-119338	Tarsius syrichta	49.30	5.00e-15	75.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence