iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131658

UUCD1 version

UUC-ViV-00472

Ensembl Protein ID

VIT_18s0117g00290.t01

UniProt Accession

F6GYS7; F6GYS7_VITVI

Genbank Protein ID

CCB45113.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594973

Gene Name

VIT_18s0117g00290

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_18s0117g00290	VIT_18s0117g00290.t01	VIT_18s0117g00290.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-76	249.3	444	484
UBD/Beta-Prp	2.30e-130	434.7	19	293

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+ +v+c+++    s ++l+sGsdD+t kvWD+    +++
   Q: 444  GHSKGVNCIDYfmrgSKPYLISGSDDHTAKVWDYQAKSCVQ 484
           8********966*85449***************99988887 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgheds 96
           +++ +++v+ +p++++++++ ++gt+ +w+++++ ll+s++  e++v++ kf+  ++++vtg++D++i+v+d++t + +  ++ h+d 
   Q: 19   QSESVKSVDLHPKEPWILASLYSGTVYIWNYHSQELLKSFKVAESPVRSAKFIACKQWIVTGADDKFIRVFDYNTMEKIAEFESHTDF 106
           4556888********************************************************************************* PP
   S: 97   vlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
           ++s++++p+  +++s+s+d  i++wd+e+g++  +t++gh + v+ v+++p++ n ++s+slD+t+++W+l++     tl g h + v
   Q: 107  IRSVAVHPTLPYVLSASDDMLIKLWDWEKGWECTQTFQGHAHYVMQVAFSPKDaNTFASASLDGTIKIWNLSSPAPDFTLDG-HSKGV 193
           *********************************99*********************************************99.***** PP
   S: 184  ysls..fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvis 269
           ++++  ++ ++++l+sgs+d t k+wd+++++cv+tl+ght+nv+ v ++++  ++++gs+Dg + iWd  +  l +tl++  ++v++
   Q: 194  NCIDyfMRGSKPYLISGSDDHTAKVWDYEAKSCVQTLEGHTNNVSAVCVHSELPLIITGSEDGNVHIWDGATYRLENTLNYGFERVWA 281
           ****8444455***************************************************************************** PP
   S: 270  vavlsfgdnvlv 281
             +++ ++++l+
   Q: 282  FGCMKGSNRILA 293
           ***777777765 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MIILCIYNIL NIYKELVQQS ESVKSVDLHP KEPWILASLY SGTVYIWNYH SQELLKSFKV 60
AESPVRSAKF IACKQWIVTG ADDKFIRVFD YNTMEKIAEF ESHTDFIRSV AVHPTLPYVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTATTT TATGTATTTA TAATATTTTA AATATCTATG TTTTATAAAT AAAATTATTA 60
CTTAAAATTA ATGAAGATAA ATATAAGTTA AAATAATTGA AAATAAAGAT TAATTAAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006891--P:intra-Golgi vesicle-mediated transport
GO:0006886--P:intracellular protein transport
GO:0006890--P:retrograde vesicle-mediated transport, Golgi to ER

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence