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Tag Content
UUCD2 ID IUUC-Vvi-130924
UUCD1 version UUC-ViV-00103
Ensembl Protein ID VIT_18s0117g00300.t01
UniProt Accession D7SS78; D7SS78_VITVI
Genbank Protein ID CBI18510.3
Protein Name Putative uncharacterized protein
Genbank Nucleotide ID FN594973
Gene Name VIT_18s0117g00300
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_18s0117g00300 VIT_18s0117g00300.t01 VIT_18s0117g00300.t01
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.60e-39 131.3 185 225
UBD/Beta-Prp 2.90e-66 224.2 16 297
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sdtllvsGsdDgtikvWDlrtgvllk 37
    gH+ +v+c+++ s ++l+sGsdD+t kvWD+ +++
   Q: 185 GHSKGVNCIDYfmrgSKPYLISGSDDHTAKVWDYEAKSCVQ 225
    8********966*85449***************99988887 PP
   


   UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgheds 96
    +++++++v+ +p++++++++ ++gt+ +w+++++ l++s++ e++v++ kf+ +++ vtg++D++i+v++++t + + +++h+d
   Q: 16 QSERVKSVDLHPKEPWILASLYSGTVCIWNYHSQELVKSFKVAESPVRSAKFIACKQWVVTGADDKFIRVFNYNTMEKIAEFEAHTDF 103
    5678999********************************************************************************* PP
   S: 97 vlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
    ++s++++p+ ++s+s+d i++wd+e+g++ +t++gh + v+ v+++p++ n ++s+slD+t+++W+l++ tl g h + v
   Q: 104 IRSVAVHPTLPCVLSASDDMLIKLWDWEKGWECTQTFQGHAHYVMQVAFSPKDvNTFASASLDGTIKVWNLSSPAPDFTLDG-HSKGV 190
    *********************************99*********************************************99.***** PP
   S: 184 ysls..fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvis 269
    ++++ ++ ++++l+sgs+d t k+wd+++++cv+tl+ght+nv+ v ++p+ ++++gs+Dg + iWd + l +t ++ ++v++
   Q: 191 NCIDyfMRGSKPYLISGSDDHTAKVWDYEAKSCVQTLEGHTNNVSAVCVHPELPLIITGSEDGNVHIWDRATYRLENTQSYGLERVWA 278
    ****8444455***************************************************************************** PP
   S: 270 vavlsfgdnvlvlgsedskv 289
    + + +++v++ + +++
   Q: 279 FGCTKESNRVVIGY-DKGTI 297
    ***66666665543.33444 PP
   

Organism Vitis vinifera
Protein Sequence
(Fasta)
MLGVNCLFGQ KELVQQSERV KSVDLHPKEP WILASLYSGT VCIWNYHSQE LVKSFKVAES 60
PVRSAKFIAC KQWVVTGADD KFIRVFNYNT MEKIAEFEAH TDFIRSVAVH PTLPCVLSAS 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Vvi-130924|E3,WD_repeat;UBD,Beta-Prp|Vitis vinifera
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGCTTGGGG TTAACTGTTT GTTCGGCCAG AAAGAACTTG TTCAACAATC AGAAAGAGTC 60
AAATCTGTGG ATCTACATCC TAAGGAACCA TGGTATAGTT ATGAATTGCT TTGATTTCAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Vvi-130924|E3,WD_repeat;UBD,Beta-Prp|Vitis vinifera
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006891--P:intra-Golgi vesicle-mediated transport
GO:0006886--P:intracellular protein transport
GO:0006890--P:retrograde vesicle-mediated transport, Golgi to ER

Created Date 25-Jun-2017

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