iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109076

Ensembl Protein ID

EFJ37222

UniProt Accession

D8QRC4; D8QRC4_SELML

Genbank Protein ID

EFJ37222.1

Protein Name

Putative uncharacterized protein ARPC1-1

Genbank Nucleotide ID

GL377566

Gene Name

ARPC1-1; SELMODRAFT_140479

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_140479	EFJ37222	EFJ37222

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-15	56.5	55	86

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H   v+++++ +  +++v+ s+D + +vW l 
   Q: 55   HDQLVSGVDWaPVsNYIVTVSHDRNSYVWKLE 86
           8899*******555***************986 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MVAVASHQLA QCISGHAWNV DLTMIAVCTN NEVHIYNASP APSAVWQRLH VLQKHDQLVS 60
GVDWAPVSNY IVTVSHDRNS YVWKLEENVW QPTLVILRIN RAAISVKWSP RENKFAVASG 120

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Nucleotide Sequence
(Fasta)

ATGGTTGCTG TGGCGTCGCA TCAATTGGCG CAATGCATCA GCGGCCACGC CTGGAATGTG 60
GATCTGACAA GTAAGAATTC TTCCTCCTCT TGCGCGTTTT AATTTTACAT CAAACAATGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

KEGG

smo:SELMODRAFT_140479

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence