iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-088775

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03101247

Gene Name

CHD5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000005703.2	ENSOGAT00000005712.2	ENSOGAP00000005103.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.00e-16	60.8	343	388

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl ++  e+ p+ + w Cp C++
   Q: 343  DYCEVCQQGGE----IILCDTCPRAYHLVCLDPE-LEKAPEGK-WSCPHCEK 388
           79*********....9******************.*******7.******86 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MRGPLGTEEE LPRLFAEEME NEDEMSEEED GGLEAFDDFF PVEPVSLPKK KKSKKLKENK 60
SKGKRKKKEG FCELSLREKH QNHKTSASKN SQSVLKKKKK KPKENESLSP RKRQVGNHED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGGGGCC CGCTGGGCAC CGAGGAGGAG CTGCCGCGGC TGTTCGCTGA GGAGATGGAG 60
AACGAGGACG AGATGTCAGG TGAGCGGGGC GCCGTGCGCC GTGGCTGGAG CGGGGGGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0016607--C:nuclear speck
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0098532--P:histone H3-K27 trimethylation
GO:0060850--P:regulation of transcription involved in cell fate commitment

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001701	Ailuropoda melanoleuca	95.96	0.00e+00	3003.00
IUUC-Apl-003406	Anas platyrhynchos	81.07	0.00e+00	2525.00
IUUC-Aca-004671	Anolis carolinensis	83.29	0.00e+00	2673.00
IUUC-Aly-005645	Arabidopsis lyrata	39.43	9.00e-153	535.00
IUUC-Ath-007406	Arabidopsis thaliana	40.23	1.00e-157	551.00
IUUC-Ame-011883	Astyanax mexicanus	80.49	0.00e+00	2125.00
IUUC-Bta-012951	Bos taurus	90.45	0.00e+00	2634.00
IUUC-Bol-016073	Brassica oleracea	41.40	4.00e-158	553.00
IUUC-Bra-016724	Brassica rapa	41.63	6.00e-159	556.00
IUUC-Cel-018108	Caenorhabditis elegans	57.31	0.00e+00	1317.00
IUUC-Cja-018871	Callithrix jacchus	90.16	0.00e+00	2838.00
IUUC-Cfa-021063	Canis familiaris	96.97	0.00e+00	2938.00
IUUC-Cpo-022083	Cavia porcellus	90.64	0.00e+00	2865.00
IUUC-Csa-023084	Chlorocebus sabaeus	97.04	0.00e+00	3135.00
IUUC-Cin-025596	Ciona intestinalis	55.45	2.00e-61	230.00
IUUC-Dre-028226	Danio rerio	78.63	0.00e+00	2422.00
IUUC-Dno-029923	Dasypus novemcinctus	96.34	0.00e+00	1953.00
IUUC-Dor-030937	Dipodomys ordii	93.35	0.00e+00	1808.00
IUUC-Dme-032150	Drosophila melanogaster	60.86	0.00e+00	1421.00
IUUC-Eca-034372	Equus caballus	96.54	0.00e+00	2929.00
IUUC-Fca-036048	Felis catus	96.22	0.00e+00	2936.00
IUUC-Fal-037282	Ficedula albicollis	88.39	0.00e+00	2789.00
IUUC-Gga-040607	Gallus gallus	88.25	0.00e+00	2379.00
IUUC-Ggo-044514	Gorilla gorilla	96.93	0.00e+00	3115.00
IUUC-Hsa-046181	Homo sapiens	96.99	0.00e+00	3101.00
IUUC-Loc-052795	Lepisosteus oculatus	80.65	0.00e+00	2670.00
IUUC-Laf-053749	Loxodonta africana	96.99	0.00e+00	3069.00
IUUC-Mcc-055856	Macaca mulatta	97.04	0.00e+00	3131.00
IUUC-Mga-059630	Meleagris gallopavo	88.74	0.00e+00	2814.00
IUUC-Mmr-060986	Microcebus murinus	94.60	0.00e+00	2985.00
IUUC-Mmu-063644	Mus musculus	94.68	0.00e+00	3032.00
IUUC-Mpu-066528	Mustela putorius furo	95.44	0.00e+00	2468.00
IUUC-Nle-069824	Nomascus leucogenys	94.09	0.00e+00	2878.00
IUUC-Ont-072647	Oreochromis niloticus	78.54	0.00e+00	2400.00
IUUC-Ola-086961	Oryzias latipes	75.84	0.00e+00	2310.00
IUUC-Oar-090301	Ovis aries	95.76	0.00e+00	2893.00
IUUC-Ptr-090586	Pan troglodytes	94.97	0.00e+00	3056.00
IUUC-Pan-092282	Papio anubis	97.09	0.00e+00	3091.00
IUUC-Psi-093007	Pelodiscus sinensis	87.23	0.00e+00	2347.00
IUUC-Pfo-096802	Poecilia formosa	76.59	0.00e+00	2273.00
IUUC-Pab-097677	Pongo abelii	98.24	0.00e+00	2494.00
IUUC-Pca-100559	Procavia capensis	93.14	0.00e+00	2868.00
IUUC-Pva-102508	Pteropus vampyrus	96.76	0.00e+00	1887.00
IUUC-Rno-105378	Rattus norvegicus	94.90	0.00e+00	2988.00
IUUC-Sha-107350	Sarcophilus harrisii	86.40	0.00e+00	2748.00
IUUC-Smo-108946	Selaginella moellendorffii	39.40	8.00e-162	565.00
IUUC-Ssc-116303	Sus scrofa	97.17	0.00e+00	2557.00
IUUC-Tgu-116779	Taeniopygia guttata	82.35	0.00e+00	2532.00
IUUC-Tru-117597	Takifugu rubripes	78.85	0.00e+00	2403.00
IUUC-Ttr-128301	Tursiops truncatus	94.42	0.00e+00	3005.00
IUUC-Xtr-132668	Xenopus tropicalis	79.79	0.00e+00	2470.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence