iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-012969

Ensembl Protein ID

ENSBTAP00000036344.4

UniProt Accession

F1MG59; F1MG59_BOVIN

Genbank Protein ID

ENSBTAP00000036344

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02054571

Gene Name

IFT122

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000019121.6	ENSBTAT00000036487.4	ENSBTAP00000036344.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-15	56.4	51	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvW 28
           gH+d v+c+a+  d ++++sGs D+++ +W
   Q: 51   GHKDTVYCVAYaKDgKRFASGSADKSVIIW 80
           8***********777*************** PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MRAVLTWRDK VEQCVYDLAF KPDGTQLIVA AGNRLLVYDT SDGTLLQPLK GHKDTVYCVA 60
YAKDGKRFAS GSADKSVIIW TSKLEGILKY THNDSIQCVS YNPITHQLAS CSSSDIGLWS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGGGAGGAG GGGCCCGAGT CTTCAGGGAA ACCGCGATGA GGGCCGTGTT GACGTGGAGA 60
GATAAAGTCG AACAGTGGTG AGGATCGGGG CTGTCCGGGA GGAGCGGGAG GCCCCGGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0036064--C:ciliary basal body
GO:0097546--C:ciliary base
GO:0005929--C:cilium
GO:0005829--C:cytosol
GO:0030991--C:intraciliary transport particle A
GO:0016020--C:membrane
GO:0005654--C:nucleoplasm
GO:0032391--C:photoreceptor connecting cilium
GO:0048593--P:camera-type eye morphogenesis
GO:0060830--P:ciliary receptor clustering involved in smoothened signaling pathway
GO:0060271--P:cilium assembly
GO:0010172--P:embryonic body morphogenesis
GO:0042733--P:embryonic digit morphogenesis
GO:0035115--P:embryonic forelimb morphogenesis
GO:0060971--P:embryonic heart tube left/right pattern formation
GO:0072594--P:establishment of protein localization to organelle
GO:0035720--P:intraciliary anterograde transport
GO:0035721--P:intraciliary retrograde transport
GO:0050680--P:negative regulation of epithelial cell proliferation
GO:0021914--P:negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning
GO:0001843--P:neural tube closure
GO:1905515--P:non-motile cilium assembly
GO:0061512--P:protein localization to cilium
GO:0007227--P:signal transduction downstream of smoothened
GO:0060831--P:smoothened signaling pathway involved in dorsal/ventral neural tube patterning

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001933	Ailuropoda melanoleuca	94.21	0.00e+00	2321.00
IUUC-Apl-003504	Anas platyrhynchos	76.06	0.00e+00	1891.00
IUUC-Aca-004767	Anolis carolinensis	84.60	0.00e+00	2131.00
IUUC-Ame-011642	Astyanax mexicanus	75.16	0.00e+00	1910.00
IUUC-Cel-018670	Caenorhabditis elegans	37.64	0.00e+00	879.00
IUUC-Cja-019249	Callithrix jacchus	85.28	0.00e+00	2091.00
IUUC-Cfa-020915	Canis familiaris	94.29	0.00e+00	2289.00
IUUC-Cpo-021888	Cavia porcellus	77.08	0.00e+00	1927.00
IUUC-Cre-022789	Chlamydomonas reinhardtii	44.09	0.00e+00	954.00
IUUC-Csa-023533	Chlorocebus sabaeus	90.49	0.00e+00	2229.00
IUUC-Cin-025121	Ciona intestinalis	57.74	0.00e+00	1496.00
IUUC-Csv-026240	Ciona savignyi	58.35	0.00e+00	1439.00
IUUC-Dno-029685	Dasypus novemcinctus	80.22	0.00e+00	1937.00
IUUC-Dme-032005	Drosophila melanogaster	25.10	4.00e-07	50.80
IUUC-Ete-032682	Echinops telfairi	84.39	0.00e+00	1682.00
IUUC-Eca-033831	Equus caballus	94.76	0.00e+00	2374.00
IUUC-Eeu-034919	Erinaceus europaeus	87.18	0.00e+00	1036.00
IUUC-Fca-036559	Felis catus	93.80	0.00e+00	2327.00
IUUC-Fal-037340	Ficedula albicollis	74.86	0.00e+00	1836.00
IUUC-Gga-040595	Gallus gallus	75.60	0.00e+00	1892.00
IUUC-Ggo-045356	Gorilla gorilla	86.43	0.00e+00	2194.00
IUUC-Hsa-046135	Homo sapiens	86.46	0.00e+00	2193.00
IUUC-Itr-048228	Ictidomys tridecemlineatus	81.42	0.00e+00	1953.00
IUUC-Lch-050183	Latimeria chalumnae	82.35	0.00e+00	1180.00
IUUC-Loc-052049	Lepisosteus oculatus	72.52	0.00e+00	1800.00
IUUC-Laf-053728	Loxodonta africana	94.29	0.00e+00	2345.00
IUUC-Mcc-054971	Macaca mulatta	87.45	0.00e+00	2209.00
IUUC-Meu-056446	Macropus eugenii	84.11	0.00e+00	2155.00
IUUC-Mga-059296	Meleagris gallopavo	81.10	0.00e+00	2098.00
IUUC-Mmr-061232	Microcebus murinus	90.11	0.00e+00	2232.00
IUUC-Mdo-062115	Monodelphis domestica	91.79	0.00e+00	2307.00
IUUC-Mmu-063664	Mus musculus	91.86	0.00e+00	2329.00
IUUC-Mpu-066136	Mustela putorius furo	90.27	0.00e+00	2243.00
IUUC-Mlu-068238	Myotis lucifugus	89.94	0.00e+00	2253.00
IUUC-Nle-069003	Nomascus leucogenys	86.48	0.00e+00	2110.00
IUUC-Ont-072080	Oreochromis niloticus	75.50	0.00e+00	1932.00
IUUC-Oan-072891	Ornithorhynchus anatinus	91.13	0.00e+00	711.00
IUUC-Ocu-074262	Oryctolagus cuniculus	91.06	0.00e+00	2234.00
IUUC-Ola-086538	Oryzias latipes	72.27	0.00e+00	1826.00
IUUC-Oga-088722	Otolemur garnettii	88.92	0.00e+00	2201.00
IUUC-Oar-089249	Ovis aries	83.09	0.00e+00	2008.00
IUUC-Ptr-090752	Pan troglodytes	82.51	0.00e+00	2050.00
IUUC-Pan-092472	Papio anubis	90.51	0.00e+00	2226.00
IUUC-Psi-093335	Pelodiscus sinensis	88.67	0.00e+00	1840.00
IUUC-Pma-094520	Petromyzon marinus	69.96	0.00e+00	1471.00
IUUC-Ppa-095600	Physcomitrella patens	61.95	2.00e-40	157.00
IUUC-Pfo-096526	Poecilia formosa	72.26	0.00e+00	1797.00
IUUC-Pab-098428	Pongo abelii	88.32	0.00e+00	1096.00
IUUC-Pca-100233	Procavia capensis	70.14	0.00e+00	941.00
IUUC-Pva-103064	Pteropus vampyrus	80.95	0.00e+00	1977.00
IUUC-Rno-105764	Rattus norvegicus	92.18	0.00e+00	2301.00
IUUC-Sha-106649	Sarcophilus harrisii	91.23	0.00e+00	2275.00
IUUC-Smo-109478	Selaginella moellendorffii	39.23	0.00e+00	734.00
IUUC-Tgu-116870	Taeniopygia guttata	82.81	0.00e+00	2036.00
IUUC-Tru-118661	Takifugu rubripes	70.32	0.00e+00	1786.00
IUUC-Tsy-119640	Tarsius syrichta	75.98	0.00e+00	658.00
IUUC-Tni-120812	Tetraodon nigroviridis	71.99	0.00e+00	1795.00
IUUC-Ttr-128862	Tursiops truncatus	90.74	0.00e+00	2310.00
IUUC-Vpa-130049	Vicugna pacos	79.47	1.00e-153	537.00
IUUC-Xtr-131914	Xenopus tropicalis	78.42	0.00e+00	1960.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence