iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Eca-033444

Ensembl Protein ID

ENSECAP00000007499.1

UniProt Accession

F6YAX1; F6YAX1_HORSE

Protein Name

Uncharacterized protein

Gene Name

IFT140

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSECAG00000009031.1	ENSECAT00000009801.1	ENSECAP00000007499.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-07	30.3	101	133

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlr 31
           +Ht+++t l +  s++ lvsG   g++ +W+l+
   Q: 101  THTADITILTWstSGNCLVSGDKLGVLLLWRLD 133
           59*********954499**************86 PP

Organism

Equus caballus

Protein Sequence
(Fasta)

MALYFDHRIE APDSVGSPSH ISWHPVHPFL VVASISTTSG GSVDIYLEQG EPVPDTHIER 60
SVRVTSLCWH PTRLILAVGW ETGEVVVFNK QDKEQHAVPP THTADITILT WSTSGNCLVS 120

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Nucleotide Sequence
(Fasta)

ATGGCCCTCT ATTTTGACCA CCGAATAGAA GCCCCAGACT CAGTCGGGTC TCCTTCCCAC 60
ATCAGCTGGC ACCCTGTTCA TCCATTCCTA GTGGTCGCCT CCATCAGCAC AACCTCAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005930--C:axoneme
GO:0005813--C:centrosome
GO:0036064--C:ciliary basal body
GO:0030991--C:intraciliary transport particle A
GO:0032391--C:photoreceptor connecting cilium
GO:0001750--C:photoreceptor outer segment
GO:0060271--P:cilium assembly
GO:0007368--P:determination of left/right symmetry
GO:1990403--P:embryonic brain development
GO:0031076--P:embryonic camera-type eye development
GO:0048701--P:embryonic cranial skeleton morphogenesis
GO:0042733--P:embryonic digit morphogenesis
GO:0007507--P:heart development
GO:0035721--P:intraciliary retrograde transport
GO:0021532--P:neural tube patterning
GO:1905515--P:non-motile cilium assembly
GO:0035845--P:photoreceptor cell outer segment organization
GO:0061512--P:protein localization to cilium
GO:1902017--P:regulation of cilium assembly
GO:0008589--P:regulation of smoothened signaling pathway
GO:0072001--P:renal system development
GO:0060041--P:retina development in camera-type eye

KEGG

ecb:100065433

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001534	Ailuropoda melanoleuca	86.18	0.00e+00	2578.00
IUUC-Apl-004045	Anas platyrhynchos	68.20	0.00e+00	1142.00
IUUC-Aca-004856	Anolis carolinensis	72.93	0.00e+00	2186.00
IUUC-Bta-013342	Bos taurus	84.69	0.00e+00	2466.00
IUUC-Cel-018591	Caenorhabditis elegans	21.72	2.00e-08	55.10
IUUC-Cja-019368	Callithrix jacchus	82.48	0.00e+00	854.00
IUUC-Cre-022796	Chlamydomonas reinhardtii	34.76	0.00e+00	776.00
IUUC-Csa-023417	Chlorocebus sabaeus	85.20	0.00e+00	2473.00
IUUC-Cin-025150	Ciona intestinalis	47.88	0.00e+00	1392.00
IUUC-Csv-025810	Ciona savignyi	32.64	5.00e-88	318.00
IUUC-Dre-027680	Danio rerio	59.38	0.00e+00	1780.00
IUUC-Fca-036025	Felis catus	86.21	0.00e+00	2566.00
IUUC-Gmo-038491	Gadus morhua	62.80	0.00e+00	1748.00
IUUC-Gac-041476	Gasterosteus aculeatus	22.75	2.00e-07	52.00
IUUC-Loc-052740	Lepisosteus oculatus	67.29	0.00e+00	2021.00
IUUC-Mga-060030	Meleagris gallopavo	20.86	5.00e-08	54.30
IUUC-Mpu-065874	Mustela putorius furo	86.87	0.00e+00	2579.00
IUUC-Mlu-067077	Myotis lucifugus	86.66	0.00e+00	2615.00
IUUC-Ont-072303	Oreochromis niloticus	60.14	0.00e+00	1747.00
IUUC-Ola-086338	Oryzias latipes	58.42	0.00e+00	1693.00
IUUC-Ptr-090583	Pan troglodytes	84.30	0.00e+00	2499.00
IUUC-Pan-092689	Papio anubis	84.72	0.00e+00	2459.00
IUUC-Psi-093824	Pelodiscus sinensis	76.95	0.00e+00	2368.00
IUUC-Pma-094497	Petromyzon marinus	59.96	0.00e+00	1814.00
IUUC-Pfo-096612	Poecilia formosa	58.91	0.00e+00	1672.00
IUUC-Pva-102236	Pteropus vampyrus	90.96	0.00e+00	1350.00
IUUC-Sha-106814	Sarcophilus harrisii	83.87	0.00e+00	2563.00
IUUC-Tru-118007	Takifugu rubripes	58.75	0.00e+00	1754.00
IUUC-Ttr-128400	Tursiops truncatus	85.80	0.00e+00	1165.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence