iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mlu-067077

Ensembl Protein ID

ENSMLUP00000009128.2

UniProt Accession

G1PF09; G1PF09_MYOLU

Genbank Protein ID

ENSMLUP00000009128

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPE02041690

Gene Name

IFT140

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMLUG00000009987.2	ENSMLUT00000010013.2	ENSMLUP00000009128.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-06	27.4	101	133

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           +Ht+++t l++ ++ + l+sG + g++ vW+l+
   Q: 101  THTADITVLNWsTNgNCLLSGDRLGVLLVWRLD 133
           5**********95569***************86 PP

Organism

Myotis lucifugus

Protein Sequence
(Fasta)

MALYFDHRIE APESAGSPSH ISWHPVHPFL AVAFVGTASR GSVDIFLEQG ERVPDTHVER 60
SCRVTSLCWH QSRLILAVGW ESGEVIMFNK QEKEQHAVPP THTADITVLN WSTNGNCLLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCCTCT ATTTTGACCA CCGGATAGAA GCCCCAGAAT CAGCTGGATC TCCTTCCCAC 60
ATCAGTTGGC ACCCTGTTCA TCCATTCCTG GCAGTGGCCT TCGTCGGCAC AGCCTCAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40

SMART

SM00028--TPR
SM00320--WD40

Gene Ontology

GO:0005930--C:axoneme
GO:0005813--C:centrosome
GO:0036064--C:ciliary basal body
GO:0030991--C:intraciliary transport particle A
GO:0032391--C:photoreceptor connecting cilium
GO:0001750--C:photoreceptor outer segment
GO:0007368--P:determination of left/right symmetry
GO:1990403--P:embryonic brain development
GO:0031076--P:embryonic camera-type eye development
GO:0048701--P:embryonic cranial skeleton morphogenesis
GO:0042733--P:embryonic digit morphogenesis
GO:0007507--P:heart development
GO:0035721--P:intraciliary retrograde transport
GO:0021532--P:neural tube patterning
GO:1905515--P:non-motile cilium assembly
GO:0035845--P:photoreceptor cell outer segment organization
GO:0061512--P:protein localization to cilium
GO:1902017--P:regulation of cilium assembly
GO:0008589--P:regulation of smoothened signaling pathway
GO:0072001--P:renal system development
GO:0060041--P:retina development in camera-type eye

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001534	Ailuropoda melanoleuca	83.41	0.00e+00	2476.00
IUUC-Apl-004045	Anas platyrhynchos	66.38	0.00e+00	1096.00
IUUC-Aca-004856	Anolis carolinensis	71.72	0.00e+00	2138.00
IUUC-Bta-013342	Bos taurus	81.46	0.00e+00	2382.00
IUUC-Cel-018591	Caenorhabditis elegans	22.88	1.00e-08	56.60
IUUC-Cja-019368	Callithrix jacchus	78.82	0.00e+00	810.00
IUUC-Cre-022796	Chlamydomonas reinhardtii	34.35	0.00e+00	767.00
IUUC-Csa-023417	Chlorocebus sabaeus	82.31	0.00e+00	2387.00
IUUC-Cin-025150	Ciona intestinalis	47.72	0.00e+00	1370.00
IUUC-Csv-025810	Ciona savignyi	31.48	2.00e-81	296.00
IUUC-Dre-027680	Danio rerio	59.56	0.00e+00	1754.00
IUUC-Eca-033444	Equus caballus	86.48	0.00e+00	2649.00
IUUC-Fca-036025	Felis catus	83.53	0.00e+00	2484.00
IUUC-Gmo-038491	Gadus morhua	62.54	0.00e+00	1726.00
IUUC-Loc-052740	Lepisosteus oculatus	66.34	0.00e+00	1981.00
IUUC-Mga-060030	Meleagris gallopavo	20.28	1.00e-08	55.80
IUUC-Mpu-065874	Mustela putorius furo	84.19	0.00e+00	2502.00
IUUC-Ont-072303	Oreochromis niloticus	59.57	0.00e+00	1731.00
IUUC-Ola-086338	Oryzias latipes	57.97	0.00e+00	1663.00
IUUC-Ptr-090583	Pan troglodytes	81.69	0.00e+00	2413.00
IUUC-Pan-092689	Papio anubis	82.46	0.00e+00	2386.00
IUUC-Psi-093824	Pelodiscus sinensis	75.26	0.00e+00	2307.00
IUUC-Pma-094497	Petromyzon marinus	60.32	0.00e+00	1793.00
IUUC-Pfo-096612	Poecilia formosa	58.69	0.00e+00	1672.00
IUUC-Pva-102236	Pteropus vampyrus	93.46	0.00e+00	1373.00
IUUC-Sha-106814	Sarcophilus harrisii	82.52	0.00e+00	2502.00
IUUC-Tru-118007	Takifugu rubripes	57.98	0.00e+00	1720.00
IUUC-Ttr-128400	Tursiops truncatus	80.52	0.00e+00	2219.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence