iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-073906

Ensembl Protein ID

ENSOCUP00000004084.3

UniProt Accession

G1SME2; G1SME2_RABIT

Genbank Protein ID

ENSOCUP00000004084

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02010639

Gene Name

WDR19

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000004716.3	ENSOCUT00000004727.3	ENSOCUP00000004084.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.10e-06	25.9	274	304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H+d  t++a  ++ +  ++++ D+ ik+ Dl 
   Q: 274  HKDNLTSIAVsPTlNKAATCG-DNCIKIHDLA 304
           9*********99999999998.899***9986 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MKRVFSLQEK AWHGTPIQFT WQKTSGNYLA VSGADHIVKI FDRHGQKRSE INLPGNCVAM 60
DWDRDGDILA VIAEKSSCIY LWDANTEKTS QLDSGMRDQM SFLLWSKIGS FLAVGTNKGN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCTGATTGG TCGCTGCTCG CGCGGTCTCC TGGGTGACGG GAACGCTCTG GCTTTCTCGG 60
AGGAGACTGG GTGCGCCTGC GCACTTAAAA GATCGCGCGG CCGCTGGAGC TTTGAGATGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0030991--C:intraciliary transport particle A
GO:0031514--C:motile cilium
GO:0005654--C:nucleoplasm
GO:0032391--C:photoreceptor connecting cilium
GO:0000902--P:cell morphogenesis
GO:0060830--P:ciliary receptor clustering involved in smoothened signaling pathway
GO:0060271--P:cilium assembly
GO:0055123--P:digestive system development
GO:0042471--P:ear morphogenesis
GO:0031076--P:embryonic camera-type eye development
GO:0048701--P:embryonic cranial skeleton morphogenesis
GO:0030326--P:embryonic limb morphogenesis
GO:0008406--P:gonad development
GO:0001701--P:in utero embryonic development
GO:0035721--P:intraciliary retrograde transport
GO:0061055--P:myotome development
GO:0050877--P:neurological system process
GO:0060831--P:smoothened signaling pathway involved in dorsal/ventral neural tube patterning

KEGG

ocu:100352314

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cel-018591	Caenorhabditis elegans	39.20	0.00e+00	1004.00
IUUC-Cpo-021608	Cavia porcellus	88.71	0.00e+00	2459.00
IUUC-Cre-022796	Chlamydomonas reinhardtii	22.32	8.00e-15	76.60
IUUC-Dre-028191	Danio rerio	76.45	0.00e+00	2159.00
IUUC-Dme-031961	Drosophila melanogaster	40.50	0.00e+00	1042.00
IUUC-Gmo-039202	Gadus morhua	76.06	0.00e+00	998.00
IUUC-Gac-041476	Gasterosteus aculeatus	65.77	0.00e+00	1898.00
IUUC-Lch-049609	Latimeria chalumnae	76.74	0.00e+00	691.00
IUUC-Loc-052919	Lepisosteus oculatus	79.55	0.00e+00	2279.00
IUUC-Mga-060030	Meleagris gallopavo	81.36	0.00e+00	2321.00
IUUC-Mpu-066840	Mustela putorius furo	92.69	0.00e+00	2534.00
IUUC-Oan-073422	Ornithorhynchus anatinus	76.82	0.00e+00	737.00
IUUC-Ola-086596	Oryzias latipes	67.38	0.00e+00	1902.00
IUUC-Rno-105208	Rattus norvegicus	90.08	0.00e+00	2511.00
IUUC-Sha-107068	Sarcophilus harrisii	81.19	0.00e+00	2286.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence