iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-090583

Ensembl Protein ID

ENSPTRP00000012987.5

UniProt Accession

H2QAA4; H2QAA4_PANTR

Genbank Protein ID

ENSPTRP00000012987

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03106295

Gene Name

IFT140

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000007600.6	ENSPTRT00000014019.5	ENSPTRP00000012987.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-05	25.7	101	133

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           +Ht+++t l++ ++ + l+sG + g++ +W+l+
   Q: 101  THTADITVLNWsPSgNCLLSGDRLGVLLLWRLD 133
           5***********6669***************86 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MALYFDHQIE ASDAAGSPSY ISWHPVHPFL AVAYISTTST GSVDIYLEQG ECVPDTHVER 60
PFRVASLCWH PTRLVLAVGW EAGEVTVFNK QDKEQHTMPL THTADITVLN WSPSGNCLLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCCTCT ATTTTGACCA CCAGATAGAA GCCTCAGATG CAGCGGGGTC ACCCTCATAC 60
ATCAGCTGGC ACCCTGTCCA TCCATTCTTG GCAGTTGCTT ACATCAGCAC AACCTCAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0005930--C:axoneme
GO:0005813--C:centrosome
GO:0036064--C:ciliary basal body
GO:0030991--C:intraciliary transport particle A
GO:0032391--C:photoreceptor connecting cilium
GO:0001750--C:photoreceptor outer segment
GO:0060271--P:cilium assembly
GO:0007368--P:determination of left/right symmetry
GO:1990403--P:embryonic brain development
GO:0031076--P:embryonic camera-type eye development
GO:0048701--P:embryonic cranial skeleton morphogenesis
GO:0042733--P:embryonic digit morphogenesis
GO:0007507--P:heart development
GO:0035721--P:intraciliary retrograde transport
GO:0021532--P:neural tube patterning
GO:1905515--P:non-motile cilium assembly
GO:0035845--P:photoreceptor cell outer segment organization
GO:0061512--P:protein localization to cilium
GO:1902017--P:regulation of cilium assembly
GO:0008589--P:regulation of smoothened signaling pathway
GO:0072001--P:renal system development
GO:0060041--P:retina development in camera-type eye

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001534	Ailuropoda melanoleuca	80.63	0.00e+00	2390.00
IUUC-Apl-004045	Anas platyrhynchos	63.75	0.00e+00	1076.00
IUUC-Aca-004856	Anolis carolinensis	69.70	0.00e+00	2099.00
IUUC-Bta-013342	Bos taurus	79.19	0.00e+00	2304.00
IUUC-Cel-018591	Caenorhabditis elegans	21.30	4.00e-07	51.20
IUUC-Cja-019368	Callithrix jacchus	91.14	0.00e+00	924.00
IUUC-Cre-022796	Chlamydomonas reinhardtii	33.98	0.00e+00	748.00
IUUC-Csa-023417	Chlorocebus sabaeus	95.78	0.00e+00	2744.00
IUUC-Cin-025150	Ciona intestinalis	46.72	0.00e+00	1355.00
IUUC-Csv-025810	Ciona savignyi	30.66	6.00e-86	311.00
IUUC-Dre-027680	Danio rerio	58.54	0.00e+00	1743.00
IUUC-Eca-033444	Equus caballus	84.28	0.00e+00	2558.00
IUUC-Fca-036025	Felis catus	80.54	0.00e+00	2380.00
IUUC-Gmo-038491	Gadus morhua	62.36	0.00e+00	1717.00
IUUC-Loc-052740	Lepisosteus oculatus	65.99	0.00e+00	1968.00
IUUC-Mpu-065874	Mustela putorius furo	80.97	0.00e+00	2407.00
IUUC-Mlu-067077	Myotis lucifugus	81.69	0.00e+00	2441.00
IUUC-Ont-072303	Oreochromis niloticus	58.45	0.00e+00	1705.00
IUUC-Ola-086338	Oryzias latipes	57.95	0.00e+00	1665.00
IUUC-Pan-092689	Papio anubis	95.57	0.00e+00	2741.00
IUUC-Psi-093824	Pelodiscus sinensis	72.72	0.00e+00	2228.00
IUUC-Pma-094497	Petromyzon marinus	59.49	0.00e+00	1781.00
IUUC-Pfo-096612	Poecilia formosa	57.56	0.00e+00	1649.00
IUUC-Pva-102236	Pteropus vampyrus	86.65	0.00e+00	1288.00
IUUC-Sha-106814	Sarcophilus harrisii	79.53	0.00e+00	2418.00
IUUC-Tru-118007	Takifugu rubripes	57.76	0.00e+00	1722.00
IUUC-Ttr-128400	Tursiops truncatus	77.69	0.00e+00	2147.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence