iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015548

Ensembl Protein ID

Bo9g093950.1

UniProt Accession

A0A0D3E9E5; A0A0D3E9E5_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo9g093950	Bo9g093950.1	Bo9g093950.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/APC_C/CDC20	7.40e-141	470.3	195	495
E3 adaptor/Cullin RING/DCX/DWD	2.40e-23	82.7	328	358

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 2    ekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladleekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltghsar 98
           +kvldap l+ddfylnL+dWs++nvlav+L+++vylw+a+t++v+kl+d+  +++v+svsw  +gt+la+Gt++g+vei+D+ ++k++rt++gh  r
   Q: 195  YKVLDAPALQDDFYLNLVDWSAQNVLAVGLANCVYLWNACTSKVTKLCDIGIDESVCSVSWALRGTHLAIGTSSGTVEIWDALRCKRIRTMEGHRLR 291
           89*********************************************************************************************** PP
   S: 99   vgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdasssePlkkfkehkaavkaiawsPwqkslL 195
           vgaL+W + vlssGsrd++il+rd+r++e ++s+l++h++evCGlkw+ d+++LasGGnDn++ vw+++s++P+ ++ eh+aavkaiawsP+ ++lL
   Q: 292  VGALAWSSSVLSSGSRDKSILQRDIRCQEDHVSKLTGHKSEVCGLKWSYDNRELASGGNDNKLLVWNQHSTQPVLRYCEHTAAVKAIAWSPHLHGLL 388
           ************************************************************************************************* PP
   S: 196  asGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetlr 292
           asGGGtaDrci+fwnt+t + l+++dt sqvc+l+wsk+ +elvsthG+++n+i++wkyp++sk+a+l+gh++Rvl+la+spdg++ivt+agDetlr
   Q: 389  ASGGGTADRCIRFWNTTTNTSLSCVDTTSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHTFRVLYLAVSPDGQTIVTGAGDETLR 485
           ************************************************************************************************* PP
   S: 293  fwklfdkkka 302
           fw++f + k+
   Q: 486  FWNVFPSPKS 495
           *****87665 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH+++v++l++  +++ l+sG++D+++ vW+
   Q: 328  GHKSEVCGLKWsyDNRELASGGNDNKLLVWN 358
           8**********964499*************9 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

KKKKESEAKR RKKKRTESKD KRKSKSENLA EERSSKRIKS TMEVDGEDPP KKLNLPPSMN 60
RPTVSLETQR INRLIDSNHY HSPSKPIYSD RFIPSRSGSN FALFGLEPSP NKDGKEDGPG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAAAAA AAGAAAGCGA AGCGAAGAGA AGAAAAAAAA AGAGGACAGA ATCCAAAGAT 60
AAGCGCAAAT CCAAATCTGA AAACCTGGCG GAGGAAAGAA GCAGCAAGAG AATCAAATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006358	Arabidopsis lyrata	85.36	0.00e+00	799.00
IUUC-Ath-006892	Arabidopsis thaliana	84.34	0.00e+00	766.00
IUUC-Bra-018065	Brassica rapa	95.40	0.00e+00	898.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence