iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	miRNAMap	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA
Post-translational Modifications (PTMs)
dbPAF	dbPTM	Phospho.ELM	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-19	70.1	313	343

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH  +vt+l++  d ++ vsGs D t k+WD
   Q: 313  GHCRDVTALEWsADeNMCVSGSSDRTAKIWD 343
           89**********556**************** PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MNNKGRTPGS AGRTVRSSAQ QNGLTMRKRD MTPTRNTNLL PNATFVGDRF LGVRLDQDEL 60
DHANHLMTSK LYSNKENLNN SMSEPNSPEK KSVEGEALKQ MMRHKSTGAL TDADDGDRIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAGCTATCGA TTCTCCACAA TGAACAACAA AGGACGCACG CCCGGTAGTG CCGGAAGAAC 60
AGTCAGATCG TCCGCACAAC AAAATGTACA GGAAGTTCAA TTATTATATT GTTGGACATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000793--C:condensed chromosome
GO:0005737--C:cytoplasm
GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

cel:CELE_ZK177.6

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence