iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099220

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000341

Gene Name

POPTR_0005s18820g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s18820	POPTR_0005s18820.1	POPTR_0005s18820.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.50e-29	100.7	19	91

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+Cp+slelM+dPv+++sG+ty+r+ I+ w++ g + cP+t+q+l++++l+ n+t+++li +wce+n++
   Q: 19   IPADFCCPLSLELMTDPVIVASGQTYERAFIKNWIELGLTVCPKTQQTLAHTNLITNYTVKALIANWCESNNV 91
           8********************************************************************9986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MHERLVLIKQ SQTYSPVPIP ADFCCPLSLE LMTDPVIVAS GQTYERAFIK NWIELGLTVC 60
PKTQQTLAHT NLITNYTVKA LIANWCESNN VKLPDPIKSM SFNQPSPLLV HAESITSREH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCTGCAAA TTGAATCATT AACATCGAAA ATTTGTTCTC TGGGCCTGAA TAGTTTTCAG 60
CTGTTAAAGG CTTCCCATCA ACAACTACCA GATGAATTAA GTTCATCATC TCTTGAGGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0005s18820g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000760	Aegilops tauschii	60.34	0.00e+00	629.00
IUUC-Atr-002793	Amborella trichopoda	63.79	0.00e+00	733.00
IUUC-Aly-006261	Arabidopsis lyrata	65.92	0.00e+00	747.00
IUUC-Ath-006925	Arabidopsis thaliana	66.08	0.00e+00	751.00
IUUC-Ago-007854	Ashbya gossypii	32.71	3.00e-16	79.70
IUUC-Ame-010822	Astyanax mexicanus	26.04	4.00e-10	60.50
IUUC-Bdi-014751	Brachypodium distachyon	73.67	2.00e-140	492.00
IUUC-Bol-015762	Brassica oleracea	70.54	4.00e-154	538.00
IUUC-Bra-018049	Brassica rapa	70.37	8.00e-153	534.00
IUUC-Cel-018336	Caenorhabditis elegans	31.45	4.00e-09	57.40
IUUC-Gma-043920	Glycine max	69.11	0.00e+00	775.00
IUUC-Hvu-047089	Hordeum vulgare	61.11	0.00e+00	692.00
IUUC-Kpa-049403	Komagataella pastoris	31.78	4.00e-19	89.40
IUUC-Lpe-051326	Leersia perrieri	62.38	0.00e+00	642.00
IUUC-Lma-053243	Leptosphaeria maculans	28.47	1.00e-20	94.70
IUUC-Mtr-057910	Medicago truncatula	72.93	0.00e+00	801.00
IUUC-Oba-075484	Oryza barthii	62.62	0.00e+00	627.00
IUUC-Obr-076317	Oryza brachyantha	62.17	2.00e-177	615.00
IUUC-Ogl-077857	Oryza glaberrima	62.62	0.00e+00	628.00
IUUC-Ogu-078826	Oryza glumaepatula	62.46	1.00e-180	626.00
IUUC-Oin-079538	Oryza indica	62.30	1.00e-179	623.00
IUUC-Olo-080425	Oryza longistaminata	61.64	1.00e-171	596.00
IUUC-Ome-081524	Oryza meridionalis	62.30	2.00e-180	625.00
IUUC-Oni-082077	Oryza nivara	62.30	3.00e-179	621.00
IUUC-Opu-083165	Oryza punctata	61.83	7.00e-180	624.00
IUUC-Oru-085180	Oryza rufipogon	62.46	2.00e-180	625.00
IUUC-Osa-085315	Oryza sativa	62.46	3.00e-180	624.00
IUUC-Pno-095110	Phaeosphaeria nodorum	28.82	1.00e-18	87.80
IUUC-Ppa-095522	Physcomitrella patens	67.87	3.00e-115	408.00
IUUC-Pte-104314	Pyrenophora teres	28.12	9.00e-19	87.80
IUUC-Sit-110349	Setaria italica	58.72	0.00e+00	647.00
IUUC-Sly-111082	Solanum lycopersicum	67.09	0.00e+00	771.00
IUUC-Stu-112751	Solanum tuberosum	66.93	0.00e+00	785.00
IUUC-Sbi-114085	Sorghum bicolor	76.75	4.00e-143	501.00
IUUC-Tca-121129	Theobroma cacao	77.24	0.00e+00	909.00
IUUC-Tae-125641	Triticum aestivum	61.59	0.00e+00	691.00
IUUC-Tur-126525	Triticum urartu	61.39	0.00e+00	630.00
IUUC-Vda-129796	Verticillium dahliae	28.12	2.00e-18	87.00
IUUC-Vvi-131364	Vitis vinifera	71.75	0.00e+00	843.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence