iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005731

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348717

Gene Name

ARALYDRAFT_906728

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_502432.1	scaffold_502432.1	scaffold_502432.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	87.09	3.00e-156	547.00	IUUC-Ath-007228
E3 activity/RING/RING	34.29	2.00e-27	119.00	IUUC-Cel-018246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGNFISGGSR PQYHRDHQSP PPLNPNPQFE GNYPLPYHHQ QDCARYPYGE MASPLQYVEH 60
QEAVTIRNDI NLKKETFRFE PDEQNPGKFL LSFTFNASVP GSISVMFFAK EGKECNFNAT 120

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Nucleotide Sequence
(Fasta)

CAATTTCGCA AAGGTGGATC ATGGGCAATT TCATAAGCGG TGGTAGCCGC CCCCAATATC 60
ACCGAGACCA TCAATCGCCG CCGCCTCTAA ACCCTAATCC TCAGTTCGAA GGCAATTATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR001841--Znf_RING

PROSITE

PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_906728

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007228	Arabidopsis thaliana	87.09	1.00e-157	547.00
IUUC-Bol-016268	Brassica oleracea	75.60	9.00e-100	355.00
IUUC-Bra-017002	Brassica rapa	74.23	1.00e-96	345.00
IUUC-Cel-018246	Caenorhabditis elegans	34.29	3.00e-28	119.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence