iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d010892	Zm00001d010892_T005	Zm00001d010892_T005
Zm00001d010892	Zm00001d010892_T016	Zm00001d010892_T016
Zm00001d010892	Zm00001d010892_T003	Zm00001d010892_T003
Zm00001d010892	Zm00001d010892_T020	Zm00001d010892_T020
Zm00001d010892	Zm00001d010892_T011	Zm00001d010892_T011
Zm00001d010892	Zm00001d010892_T026	Zm00001d010892_T026
Zm00001d010892	Zm00001d010892_T013	Zm00001d010892_T013
Zm00001d010892	Zm00001d010892_T012	Zm00001d010892_T012
Zm00001d010892	Zm00001d010892_T018	Zm00001d010892_T018
Zm00001d010892	Zm00001d010892_T014	Zm00001d010892_T014
Zm00001d010892	Zm00001d010892_T010	Zm00001d010892_T010
Zm00001d010892	Zm00001d010892_T015	Zm00001d010892_T015

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-22	79.4	279	310

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDl 30
           H+++v+++ f   +++ l sGsdD  +kvWD 
   Q: 279  HKADVNAVTFadeTGNVLYSGSDDSLCKVWDR 310
           99*********75559***************5 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MGPACHGGTS SPAIQRGILL DWPDPSVLVS ASMQGRMRGA RRSARGESSR KAAGREVEPF 60
TLCGEMSHLT RATSEPCRRA RGAAFARRAR PFSAYELVSA REAGRAGGAG FSAADRAYLG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTCCGG CGTGCCAGTG AGAGCGGGAG AAGCTCGGAC ATCTCCGGTA TGGTTCCACT 60
GGTCCAGGGG ACAAAATCTG CTGCCAGTTT CTGCAATTGC TTGTTTTTTT TCGCTGTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR027295--Quinoprotein_ADH-like_fam
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000659	Aegilops tauschii	51.97	8.00e-135	473.00
IUUC-Aml-001732	Ailuropoda melanoleuca	41.94	3.00e-87	315.00
IUUC-Aca-005081	Anolis carolinensis	42.42	5.00e-87	314.00
IUUC-Ame-011825	Astyanax mexicanus	41.73	4.00e-80	291.00
IUUC-Bta-013043	Bos taurus	41.54	3.00e-87	315.00
IUUC-Bdi-014294	Brachypodium distachyon	76.92	0.00e+00	655.00
IUUC-Cel-018145	Caenorhabditis elegans	35.77	2.00e-63	236.00
IUUC-Cfa-020064	Canis familiaris	41.69	3.00e-87	315.00
IUUC-Cpo-022220	Cavia porcellus	41.03	1.00e-85	310.00
IUUC-Cre-022728	Chlamydomonas reinhardtii	47.68	1.00e-61	229.00
IUUC-Csa-023158	Chlorocebus sabaeus	41.49	4.00e-86	311.00
IUUC-Cho-024797	Choloepus hoffmanni	55.45	4.00e-26	112.00
IUUC-Cme-027273	Cyanidioschyzon merolae	32.23	2.00e-50	193.00
IUUC-Dre-028711	Danio rerio	42.67	2.00e-86	312.00
IUUC-Dor-030952	Dipodomys ordii	41.71	2.00e-82	299.00
IUUC-Dme-031925	Drosophila melanogaster	36.48	1.00e-61	230.00
IUUC-Eca-033499	Equus caballus	41.28	3.00e-86	311.00
IUUC-Eeu-035179	Erinaceus europaeus	44.01	4.00e-70	258.00
IUUC-Fca-035615	Felis catus	41.69	8.00e-87	313.00
IUUC-Gmo-038731	Gadus morhua	43.51	5.00e-88	317.00
IUUC-Gac-041615	Gasterosteus aculeatus	43.19	1.00e-85	309.00
IUUC-Hsa-046061	Homo sapiens	41.39	2.00e-86	312.00
IUUC-Hvu-047177	Hordeum vulgare	79.02	7.00e-106	375.00
IUUC-Lpe-051521	Leersia perrieri	72.35	0.00e+00	664.00
IUUC-Laf-054259	Loxodonta africana	41.12	3.00e-86	311.00
IUUC-Mcc-054958	Macaca mulatta	41.39	2.00e-86	312.00
IUUC-Meu-056889	Macropus eugenii	41.25	6.00e-86	311.00
IUUC-Mvi-060439	Microbotryum violaceum	36.79	7.00e-74	271.00
IUUC-Mmr-061329	Microcebus murinus	41.21	1.00e-82	300.00
IUUC-Mdo-062123	Monodelphis domestica	41.88	2.00e-85	309.00
IUUC-Mpu-066351	Mustela putorius furo	41.57	6.00e-73	267.00
IUUC-Mlu-067043	Myotis lucifugus	41.43	5.00e-86	311.00
IUUC-Nle-070052	Nomascus leucogenys	41.54	4.00e-86	311.00
IUUC-Opr-070605	Ochotona princeps	42.16	8.00e-87	313.00
IUUC-Ont-072411	Oreochromis niloticus	43.19	1.00e-81	296.00
IUUC-Ocu-074078	Oryctolagus cuniculus	41.54	5.00e-86	311.00
IUUC-Oba-075901	Oryza barthii	73.01	0.00e+00	653.00
IUUC-Obr-076556	Oryza brachyantha	73.61	0.00e+00	657.00
IUUC-Ogl-077227	Oryza glaberrima	73.01	0.00e+00	653.00
IUUC-Ogu-078264	Oryza glumaepatula	67.21	4.00e-177	613.00
IUUC-Oin-079655	Oryza indica	72.35	0.00e+00	650.00
IUUC-Olo-080362	Oryza longistaminata	63.97	1.00e-165	575.00
IUUC-Ome-081712	Oryza meridionalis	72.79	0.00e+00	653.00
IUUC-Oni-083108	Oryza nivara	72.35	0.00e+00	650.00
IUUC-Opu-084070	Oryza punctata	73.01	0.00e+00	655.00
IUUC-Oru-085194	Oryza rufipogon	72.12	0.00e+00	647.00
IUUC-Osa-085897	Oryza sativa	74.47	2.00e-149	521.00
IUUC-Ola-086329	Oryzias latipes	43.40	7.00e-87	313.00
IUUC-Oar-089262	Ovis aries	41.54	4.00e-87	315.00
IUUC-Ptr-091346	Pan troglodytes	41.39	2.00e-86	312.00
IUUC-Pan-092716	Papio anubis	41.39	3.00e-86	312.00
IUUC-Pma-094148	Petromyzon marinus	50.00	6.00e-69	253.00
IUUC-Pfo-096424	Poecilia formosa	43.11	6.00e-86	311.00
IUUC-Pab-098091	Pongo abelii	39.33	1.00e-78	286.00
IUUC-Pva-102598	Pteropus vampyrus	41.69	3.00e-86	311.00
IUUC-Pgr-103327	Puccinia graminis	32.85	5.00e-64	238.00
IUUC-Sha-106540	Sarcophilus harrisii	42.31	6.00e-85	307.00
IUUC-Sit-109840	Setaria italica	81.37	0.00e+00	756.00
IUUC-Sar-113742	Sorex araneus	41.43	4.00e-86	311.00
IUUC-Sbi-114505	Sorghum bicolor	86.31	5.00e-160	556.00
IUUC-Tru-118536	Takifugu rubripes	43.99	3.00e-86	312.00
IUUC-Tsy-119518	Tarsius syrichta	41.54	2.00e-86	312.00
IUUC-Tni-120264	Tetraodon nigroviridis	43.85	1.00e-86	313.00
IUUC-Tre-122144	Trichoderma reesei	37.53	2.00e-66	245.00
IUUC-Tae-124083	Triticum aestivum	75.11	0.00e+00	648.00
IUUC-Tur-126484	Triticum urartu	57.60	4.00e-137	480.00
IUUC-Tbe-127495	Tupaia belangeri	41.39	1.00e-86	313.00
IUUC-Ttr-128553	Tursiops truncatus	41.69	6.00e-87	314.00
IUUC-Vpa-130542	Vicugna pacos	50.00	4.00e-35	142.00
IUUC-Xtr-132525	Xenopus tropicalis	42.22	1.00e-85	309.00
IUUC-Xma-133165	Xiphophorus maculatus	43.44	1.00e-86	313.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence